Protein Alignment Tsp42Eq and Tspan1

DIOPT Version :9

• Sequence 1: NP_523643.2
• Gene: Tsp42Eq / 35628
• FlyBaseID: FBgn0033138
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_001004236.1
• Gene: Tspan1 / 298436
• RGDID: 1303308
• Length: 241
• Species: Rattus norvegicus
• Alignment Length: 269
• Identity: 60/269 - (22%)
• Similarity: 94/269 - (34%)
• Gaps: 87/269 - (32%)

  Fly     1 MSCGTKALKVSSFVLDFLCCVLAALTIAACSYALIAFSHSVAIRVPSILG--------------- 50
            |.| .|.:||        ..:|..|.|..|..||:|....|::...|.|.
  Rat     1 MQC-FKFIKV--------MMILFNLLIFLCGAALLAVGIWVSVDGTSFLKAFGSLSSSAMQFVNV 56

  Fly    51 ----IVLGGLLFFSTIFGCIAALRESIRMTWIYAAILLALVFSQIT-VILAQPINYELLANETI- 109
                |..|.:||.....||..|..|:..:..::.:|||.:..::|. .::|  :.|..:|.:.:
  Rat    57 GYFLIAAGAVLFILGFLGCYGAHSENKCVLMMFFSILLIIFIAEIAGAVVA--LVYTTMAEQFLT 119

  Fly   110 ------------YDAWQGQLYHSDRMSYFEIKYHCCGQTGPANYPD--------SGLVIPQSCYF 154
                        |.....|:::|....     .||||..   ||.|        ...|.|..|..
  Rat   120 FLVVPAIEKDYGYQTEFTQVWNSTMEG-----LHCCGFN---NYTDFNSSRFVKENKVFPPFCCA 176

  Fly   155 NQNATVTTDLYTV--------------GCNHQLAAAFVKGTRWEKITDWSV-VGV---EILTVII 201
            |     .||.:||              ||..|:    ::..|...:|...| |||   |:..:::
  Rat   177 N-----NTDSHTVEPCTEDKAKSMNVQGCFKQI----LQKIRTNAVTVGGVAVGVAALELAAMVV 232

  Fly   202 AGLLAITLQ 210
            :..|...|:
  Rat   233 SMYLYCNLK 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Eq	NP_523643.2	Tetraspannin	8..209	CDD:278750	56/259 (22%)
		tetraspanin_LEL	95..173	CDD:239401	23/112 (21%)
Tspan1	NP_001004236.1	Tetraspannin	7..236	CDD:395265	55/255 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3882
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR19282
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910