DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eq and tsp-8

DIOPT Version :9

Sequence 1:NP_523643.2 Gene:Tsp42Eq / 35628 FlyBaseID:FBgn0033138 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_510445.1 Gene:tsp-8 / 181567 WormBaseID:WBGene00006634 Length:282 Species:Caenorhabditis elegans


Alignment Length:274 Identity:55/274 - (20%)
Similarity:99/274 - (36%) Gaps:73/274 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SCGTKALKVSSFVLDFLC----CVLAALTI------AACSYALIAFSHSVAIRVPSILGIVLGGL 56
            || ..||::.:|:.:|..    .|:..|.|      ||..:..:..:|..|.|......:..|.:
 Worm     3 SC-VNALRIVTFLFNFAFWLSGVVVFGLGIWLLFDPAASDFFALHSTHPGAFRYVGWFLVGAGAI 66

  Fly    57 LFFSTIFGCIAALRESIRMTWIYAAILLALVFSQITVILA-----QPINY--ELLANETIYDAWQ 114
            :.....||||.|.:.:......:..||:...|.::...:.     :.|.:  |....:||.:.:.
 Worm    67 IILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRNRYS 131

  Fly   115 GQLYHSDRMSYFEIKYHCCG------------QTGPA-----NYPDSGLV--------------- 147
            .:....|.....:.|:.|||            ...|:     |..|:|.:               
 Worm   132 SETAFKDAFDTVQEKFECCGVKTYTDWLSARWDAEPSTQLEVNEEDAGRIEHGIGAFGGNKGTGY 196

  Fly   148 --IPQSCYFNQNATVTTDLYTVGCNHQLA-------AAFVKGTR------WEKITD--WSVVGVE 195
              :|.|| .|::..::   |...|....:       |.|: .||      :|.::.  ..:|||.
 Worm   197 GRVPSSC-CNEHGKLS---YPNNCGRSFSQAPLNTYAQFI-NTRGCADAVYESVSSSLSLIVGVC 256

  Fly   196 ILTVIIAGLLAITL 209
            ::..|:. ||.|.|
 Worm   257 VVLCIVQ-LLGIVL 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EqNP_523643.2 Tetraspannin 8..209 CDD:278750 51/266 (19%)
tetraspanin_LEL 95..173 CDD:239401 19/118 (16%)
tsp-8NP_510445.1 Tetraspannin 8..276 CDD:278750 52/268 (19%)
Heme_Cu_Oxidase_I 13..>108 CDD:294196 19/94 (20%)
tetraspanin_LEL 108..243 CDD:239401 23/139 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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