DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eq and tsp-9

DIOPT Version :9

Sequence 1:NP_523643.2 Gene:Tsp42Eq / 35628 FlyBaseID:FBgn0033138 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_508232.1 Gene:tsp-9 / 180472 WormBaseID:WBGene00006635 Length:233 Species:Caenorhabditis elegans


Alignment Length:247 Identity:57/247 - (23%)
Similarity:85/247 - (34%) Gaps:75/247 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSCGTKALKVSSFVLDFLCCVLAALTIAACSYALIA-----FSHSVAIRVPSILGI--------- 51
            |.||...:|:..||::|..|:..||   .|.::|.|     |...::..|..|.||         
 Worm     1 MVCGNSCIKLLFFVINFFICIFGAL---ICGFSLWANLDKNFGSHLSDFVRQIEGIDQKLVNEIA 62

  Fly    52 ----------VLGGLLFFSTIFGCIAALRESIRMTWIYAAILLALVFSQITVILAQPINYELLA- 105
                      .:|.|||....|||..|..||        .:||.|....|.::.|..:...:.| 
 Worm    63 EYQASLWILVAVGALLFLVGFFGCCGAGCES--------PVLLGLFIFIIVILTAVELGATVFAM 119

  Fly   106 --NETIYDAWQGQLYHSDRMSYFEIK---------YHCCGQTGPA--NYPDSGLVIPQSCYFNQN 157
              .|....:.|..|..|.  :.:|::         :.|||.|...  .|...||..|:..     
 Worm   120 TNREEFVSSIQQVLKKSS--ATYELRKNIKPIQNVFQCCGATAQTQNRYIQDGLCGPEPL----- 177

  Fly   158 ATVTTDLYTVGCNHQLAAAFVKGTRWEKITDWSVVGVEILTVIIAGLLAITL 209
                  ...|.|..:::         ..:..|.    |.:.|:...||||.|
 Worm   178 ------SAPVNCFDRIS---------HMVQSWG----ESIVVVAFLLLAIEL 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EqNP_523643.2 Tetraspannin 8..209 CDD:278750 53/238 (22%)
tetraspanin_LEL 95..173 CDD:239401 17/91 (19%)
tsp-9NP_508232.1 Tetraspannin 7..222 CDD:278750 54/241 (22%)
tetraspanin_LEL 116..>167 CDD:243179 10/52 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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