DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eq and Cd53

DIOPT Version :9

Sequence 1:NP_523643.2 Gene:Tsp42Eq / 35628 FlyBaseID:FBgn0033138 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_031677.1 Gene:Cd53 / 12508 MGIID:88341 Length:219 Species:Mus musculus


Alignment Length:228 Identity:51/228 - (22%)
Similarity:99/228 - (43%) Gaps:52/228 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KALKVSSFVLDFL-----CCVLAALTIAACSYALIAFSHSVAIR-VPSI-LG---IVLGGLLFFS 60
            |.||...|:.:.|     ||:|     ....|.|:..::.|..| :|.: ||   :::|.::...
Mouse     7 KLLKYVLFIFNLLFWVCGCCIL-----GFGIYFLVQNTYGVLFRNLPFLTLGNILVIVGSIIMVV 66

  Fly    61 TIFGCIAALRESIRMTWIYAAILLALVFSQITV-----ILAQPINYELLANETIYDAWQGQLYHS 120
            ...||:.:::|:..:...:..:||.::.:::|:     :..|.:|  .|..|.:.|:.|.  |||
Mouse    67 AFLGCMGSIKENKCLLMSFFVLLLIILLAEVTIAILLFVYEQKLN--TLVAEGLNDSIQH--YHS 127

  Fly   121 DRMS-----YFEIKYHCCGQTGPANYPDSGLVIPQSCYFNQNATVTTDLYTVGCNHQLAAAFVKG 180
            |..:     :.:.:..|||..|.:::....   |.||  ...|.|.      ||       :.|.
Mouse   128 DNSTMKAWDFIQTQLQCCGVNGSSDWTSGP---PSSC--PSGADVQ------GC-------YNKA 174

  Fly   181 TRWEKITDWSVVGVEILTVIIAGLL----AITL 209
            ..|.. :::..:|:..:.|.:..:|    |:||
Mouse   175 KSWFH-SNFLYIGIITICVCVIQVLGMSFALTL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EqNP_523643.2 Tetraspannin 8..209 CDD:278750 48/224 (21%)
tetraspanin_LEL 95..173 CDD:239401 21/82 (26%)
Cd53NP_031677.1 Tetraspannin 9..210 CDD:278750 50/226 (22%)
CD53_like_LEL 104..186 CDD:239417 23/104 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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