DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eq and Tsp68C

DIOPT Version :9

Sequence 1:NP_523643.2 Gene:Tsp42Eq / 35628 FlyBaseID:FBgn0033138 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster


Alignment Length:200 Identity:37/200 - (18%)
Similarity:70/200 - (35%) Gaps:67/200 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FVLD-----FLCC-----------------VLAALTIAACSYALIAFSHSVAIRVPSILGIVLGG 55
            |||:     ||.|                 :|.:..:||.|..|.:....:...:  .||:.:.|
  Fly     9 FVLNLCNFLFLICGLLLVVSGLYIFSDNKRILLSRLLAASSDRLSSLPQPLLFYI--ALGVAIAG 71

  Fly    56 LL-FFSTIFGCIAALRESIRMTWIYAAILLALVFSQITVILAQPI-------------------- 99
            .: ..:.:.|..|:...:.....||...::.|:.::..:.||..:                    
  Fly    72 FVATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTESVLCLAITLWPHCLGISLDETQMVRSLQS 136

  Fly   100 NYELLANETIYDAWQGQLYHSDRMSYFEIKYHCCGQTGPANYPDSGL-----------VIPQSCY 153
            ||.:          .||...::.:...::::.|||.....:| |:.|           .:|.||.
  Fly   137 NYGV----------PGQEQFTNALDLAQVRFGCCGMRSSLDY-DTSLWRLQGYGQRNWPVPLSCC 190

  Fly   154 FNQNA 158
            |.:||
  Fly   191 FLKNA 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EqNP_523643.2 Tetraspannin 8..209 CDD:278750 36/199 (18%)
tetraspanin_LEL 95..173 CDD:239401 17/94 (18%)
Tsp68CNP_729926.1 Tetraspannin 8..267 CDD:278750 36/199 (18%)
tetraspanin_LEL 117..241 CDD:239401 15/89 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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