DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant3 and galnt10

DIOPT Version :10

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001072444.1 Gene:galnt10 / 779898 XenbaseID:XB-GENE-1010672 Length:603 Species:Xenopus tropicalis


Alignment Length:587 Identity:206/587 - (35%)
Similarity:300/587 - (51%) Gaps:102/587 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 GEGADGRPVVVPPRDRFRMQRFFRLNSFNLLASDRIPLNRTLKDYRTPECRDKKYASGLPSTSVI 155
            |.|..|:|  .|..|...:.:.:|.|.||:..||:|.|||:|.|.|...|::|.|.|.||:||||
 Frog    85 GNGEQGKP--FPMTDADHVDQAYRENGFNIFVSDKISLNRSLPDIRNSNCKNKFYFSKLPNTSVI 147

  Fly   156 IVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYV----KVLAVPTRIFR 216
            |.||||.||.||||:.||:||||..|:.||:||||.||:::||.:||.|:    ||     :|.|
 Frog   148 IPFHNEGWSSLLRTVHSVLNRSPPELIAEIVLVDDYSDKAHLKSRLEKYMANFPKV-----KIVR 207

  Fly   217 MKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFS 281
            .|||.||:..|:|||..|.|:||||||:|||.:..||.|||..:.::.|.|:||:||:|..|||.
 Frog   208 TKKREGLIRTRMLGATVASGEVLTFLDSHCEANVNWLPPLLDPLVQNYKTVVCPMIDVIDSDNFG 272

  Fly   282 Y-TKTFENHWGAFNWQLSFRWFSSDRKRQTAGNSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSY 345
            | |:..:...|||:|::.::......:.|..     |.:||..:|.||||||||:|::|:::|.|
 Frog   273 YVTQAGDAMRGAFDWEMFYKRIPIPPELQKG-----DPSDPFDSPVMAGGLFAINREWFWQLGGY 332

  Fly   346 DSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAATVWM 410
            |..:.:||||..|:||::|.||||:..||||.|||::|...||..|.|:|  |..||.|.|.|||
 Frog   333 DPGLEIWGGEQYEISFKVWMCGGRMVDSPCSRVGHIYRKYVPYKVPAGVS--LARNLKRVAEVWM 395

  Fly   411 DDWQYFIMLYTSG---LTLGAKDKVNVTERVALRERLQCKPFSWYLENI-W--PEHFFPA--PDR 467
            |::..:|......   |::|     :|..:..||.:|||:.|.|::..| |  |:::.|.  |..
 Frog   396 DEYAEYIYQRRPDYRHLSVG-----DVAAQKELRRKLQCRDFKWFMNEIAWDLPKYYPPVELPPA 455

  Fly   468 FFGKI--IWLDGETECAQAYSKHMKNLPGRALSREWKRAFEEIDSKAEELMALIDLERDKCLRP- 529
            .:|:|  :.:|   .|...  ||:.:  |..:..|........|:.....:..:....|  :|| 
 Frog   456 AWGEIRNVRMD---MCVGV--KHVTS--GTEIRLEACNKGRNSDTWGARQVFTLGWRED--IRPG 511

  Fly   530 LKEDVPRSSLSAVTVGDCTSHAQSMDMFVITPKGQIMTNDNVCLTYRQQKLGVIKMLKNRNATTS 594
            :.:...:|...||                                                :.||
 Frog   512 IPQHTMKSCFDAV------------------------------------------------SQTS 528

  Fly   595 NVMLAQC-ASDSSQLWTYDMDTQQISHRDTKLCLTLKAATNSRLQKVEKVVLSMECDFKDITQKW 658
            .|.|..| ....:|||.|..| :.:.|..:..|:.....        |..:...:|:....||:|
 Frog   529 PVTLFDCHGMKGNQLWKYRRD-KTVYHPTSNSCMDCNEG--------EYKIFMNKCNPSSPTQQW 584

  Fly   659 GF 660
            .|
 Frog   585 TF 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 pp-GalNAc-T 153..457 CDD:133004 143/312 (46%)
beta-trefoil_Ricin_Pgant3-like 515..661 CDD:467338 24/148 (16%)
galnt10NP_001072444.1 pp-GalNAc-T 145..440 CDD:133004 142/311 (46%)
beta-trefoil_Ricin-like 451..600 CDD:483949 34/202 (17%)

Return to query results.
Submit another query.