DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Pgant3 and galnt10

DIOPT Version :9

Sequence 1:	NP_610256.1	Gene:	Pgant3 / 35627	FlyBaseID:	FBgn0027558	Length:	667	Species:	Drosophila melanogaster
Sequence 2:	NP_001070072.1	Gene:	galnt10 / 767665	ZFINID:	ZDB-GENE-030131-595	Length:	261	Species:	Danio rerio

Alignment Length:	173	Identity:	94/173 - (54%)
Similarity:	116/173 - (67%)	Gaps:	3/173 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly    91 GEGADGRPVVVPPRDRFRMQRFFRLNSFNLLASDRIPLNRTLKDYRTPECRDKKYASGLPSTSVI 155
            |.|..|||  .|..|..|:.:.:|.|.||:..||||.|||:|.|.|.|.|:.|.|.:.||:||||
Zfish    79 GAGEQGRP--YPLTDAERVDQAYRENGFNIFVSDRIALNRSLPDIRHPNCKLKLYTADLPNTSVI 141

  Fly   156 IVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYVKVLAVPTRIFRMKKR 220
            |.||||.||.||||:.||::|||..|:.|||||||.||:.:||..||.|: |.....||.|.:||
Zfish   142 IPFHNEGWSSLLRTVHSVLDRSPPSLIAEIILVDDFSDKGHLKAPLEQYM-VRLPKVRILRTQKR 205

  Fly   221 SGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKES 263
            .||:..|||||..|||.|:||||:|||.:..||.|||.||.::
Zfish   206 EGLIRTRLLGAAAARGQVITFLDSHCEANVNWLPPLLDRIAQN 248

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Pgant3	NP_610256.1	Glyco_tranf_2_3	150..386	CDD:290369	67/114 (59%)
		pp-GalNAc-T	153..457	CDD:133004	65/111 (59%)
		Ricin_B_lectin	516..658	CDD:279046
		RICIN	524..660	CDD:238092
galnt10	NP_001070072.1	WcaA	134..>260	CDD:223539	68/116 (59%)
galnt10	NP_001070072.1	Glyco_tranf_GTA_type	139..>253	CDD:299700	65/111 (59%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910