DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant3 and GALNT16

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001161840.1 Gene:GALNT16 / 57452 HGNCID:23233 Length:558 Species:Homo sapiens


Alignment Length:553 Identity:185/553 - (33%)
Similarity:271/553 - (49%) Gaps:85/553 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 FRLNSFNLLASDRIPLNRTLKDYRTPECRDKKYASGLPSTSVIIVFHNEAWSVLLRTITSVINRS 177
            :|.::||.|.||::..:|.::|.|...|....|:|.||:|||||.|||||.|.||||:.||:||:
Human    86 YRQHAFNQLESDKLSPDRPIRDTRHYSCPSVSYSSDLPATSVIITFHNEARSTLLRTVKSVLNRT 150

  Fly   178 PRHLLKEIILVDDASDRSYLKRQLESYVKVLAVP-TRIFRMKKRSGLVPARLLGAENARGDVLTF 241
            |.:|::|||||||.|.      ..|..:.:..:| .:..|..:|.||:.:|:.||:.|...||||
Human   151 PANLIQEIILVDDFSS------DPEDCLLLTRIPKVKCLRNDRREGLIRSRVRGADVAAATVLTF 209

  Fly   242 LDAHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFSYTKTFENHWGAFNWQLSFRWFSSDR 306
            ||:|||.:..||.|:|.|:||....|:.|:||:||.|||:|.....:..|.|:|.|.|:|.....
Human   210 LDSHCEVNTEWLPPMLQRVKEDHTRVVSPIIDVISLDNFAYLAASADLRGGFDWSLHFKWEQIPL 274

  Fly   307 KRQTAGNSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVE 371
            :::.   :..|.|.||.||.:|||:|.||:.:|..:|.||:.|.:|||||.|:|||:|.|||.:|
Human   275 EQKM---TRTDPTRPIRTPVIAGGIFVIDKSWFNHLGKYDAQMDIWGGENFELSFRVWMCGGSLE 336

  Fly   372 ISPCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAATVWMDDW-QYFIMLYTSGLTLGAKDKVNVT 435
            |.|||.||||||...||.||.|.:.....|..|.|.||||:: ||:.....|.:   .|...:|.
Human   337 IVPCSRVGHVFRKRHPYNFPEGNALTYIRNTKRTAEVWMDEYKQYYYEARPSAI---GKAFGSVA 398

  Fly   436 ERVALRERLQCKPFSWYLENIWPEHFFPAPDRFFGKIIWLDGETECAQAYSKHMKNLPGRALSRE 500
            .|:..|:::.||.|.|||||::||...|..:.                        |||..    
Human   399 TRIEQRKKMNCKSFRWYLENVYPELTVPVKEA------------------------LPGII---- 435

  Fly   501 WKRAFEEIDSKAEELMALIDLERDKCLRPLKEDVPRSSLSAVTVGDCTSHAQSMDMFVITPKGQI 565
             |:....::|:.:.......|....|....|...|             :.|......:|..:|:.
Human   436 -KQGVNCLESQGQNTAGDFLLGMGICRGSAKNPQP-------------AQAWLFSDHLIQQQGKC 486

  Fly   566 MTNDNVCLTYRQQKLGVIKMLKNRNATTSNVMLAQC-ASDSSQLWTYDMDTQQISHRDTKLCLTL 629
            :...:..:                ::..|.|:|..| ..:..|.|.  .....|.|..:.|||..
Human   487 LAATSTLM----------------SSPGSPVILQMCNPREGKQKWR--RKGSFIQHSVSGLCLET 533

  Fly   630 KAATNSRLQKVEKVVLSMECDFKDITQKWGFIP 662
            |.|.          :::.:|......|:|..:|
Human   534 KPAQ----------LVTSKCQADAQAQQWQLLP 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 113/236 (48%)
pp-GalNAc-T 153..457 CDD:133004 138/305 (45%)
Ricin_B_lectin 516..658 CDD:279046 22/142 (15%)
RICIN 524..660 CDD:238092 22/136 (16%)
GALNT16NP_001161840.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..54
Catalytic subdomain A 122..227 54/110 (49%)
pp-GalNAc-T 126..420 CDD:133004 138/305 (45%)
Catalytic subdomain B 286..348 37/61 (61%)
Ricin_B_lectin 441..543 CDD:395527 21/142 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.