DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and galnt2

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_009305623.1 Gene:galnt2 / 570248 ZFINID:ZDB-GENE-041111-110 Length:565 Species:Danio rerio


Alignment Length:605 Identity:215/605 - (35%)
Similarity:300/605 - (49%) Gaps:125/605 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 GNMTADDYNINLFQPINGEGADGRPVVVPPRDRFRMQRFFRLNSFNLLASDRIPLNRTLKDYRTP 138
            |.:...||:.:|:.        |..||.|.:|.:..      |.||.:.||::.::|.:.|.|..
Zfish    62 GKVRWQDYDQDLYV--------GATVVRPGQDPYAR------NKFNQVESDKLRMDRNIPDTRHD 112

  Fly   139 ECRDKKYASGLPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLES 203
            .||.|::.:.||::||:|.|||||.|.||||:.||:.:||.||:||||||||.||.......|..
Zfish   113 HCRHKQWRTDLPASSVVITFHNEARSALLRTVISVLKKSPPHLVKEIILVDDYSDNPEDGALLGK 177

  Fly   204 YVKVLAVPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVI 268
            ..||     |:.|..:|.||:.:|:.||:.|...||||||:||||:..||||||.|:.|.:..|:
Zfish   178 IEKV-----RVLRNDRREGLMRSRVRGADAATASVLTFLDSHCECNEHWLEPLLERVAEDKTRVV 237

  Fly   269 CPVIDIISDDNFSYTKTFENHWGAFNWQLSFRW--FSSDRKRQTAGNSSKDSTDPIATPGMAGGL 331
            .|:||:|:.|||.|.....:..|.|:|.|.|:|  .:.:::|...||    ...||.||.:||||
Zfish   238 SPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTLEQRRARQGN----PIAPIKTPMIAGGL 298

  Fly   332 FAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPYTFPGGMSE 396
            |.:|:.||.|:|.||..|.||||||:|:|||:|||||.:||.|||.||||||...|||||||...
Zfish   299 FVMDKDYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGT 363

  Fly   397 VLTDNLARAATVWMDDWQYFIMLYTSGLTLGAKDKVNVTERVALRERLQCKPFSWYLENIWPEHF 461
            |...|..|||.|||||::.|  .|.:..:.......|:..|:.:::||.||||.|||||::||..
Zfish   364 VFARNTRRAAEVWMDDFKNF--YYAAVPSARNVPYGNIQSRLEMKKRLGCKPFKWYLENVYPELR 426

  Fly   462 FP-APDRFFGKI----IWLD----------GETECAQAYSKHMKNLPGRALSREWKRAFEEIDSK 511
            .| ..|..||.:    ..||          |..||..|....:.|     .::||.         
Zfish   427 VPDHQDIAFGALQQGQNCLDTLGHFADGVVGVYECHNAGGNQVSN-----KTQEWA--------- 477

  Fly   512 AEELMALIDLERDKCLRPLKEDVPRSSLSAVTVGDCTSHAQSMDMFVITPKGQIMTNDNVCLTYR 576
                     |.:||.::                        .||:               |||..
Zfish   478 ---------LTKDKSVK------------------------HMDL---------------CLTVV 494

  Fly   577 QQKLGVIKMLKNRNATTSNVMLAQC-ASDSSQLWTYDMDTQQISHRDTKLCLTLKAATNSRLQKV 640
            .:..|            |.:.|..| .:|:.|.|....:..::.|..:.|||..::|.:..    
Zfish   495 DRTAG------------SQIKLQGCRENDTRQKWEQIDNNTKLRHVGSNLCLDSRSARSGG---- 543

  Fly   641 EKVVLSMECDFKDITQKWGF 660
                |::|.....:||:|.|
Zfish   544 ----LTVEVCSPSLTQQWKF 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 121/237 (51%)
pp-GalNAc-T 153..457 CDD:133004 152/305 (50%)
Ricin_B_lectin 516..658 CDD:279046 24/142 (17%)
RICIN 524..660 CDD:238092 24/136 (18%)
galnt2XP_009305623.1 pp-GalNAc-T 127..422 CDD:133004 152/305 (50%)
Glyco_tranf_2_3 127..351 CDD:290369 119/232 (51%)
Ricin_B_lectin 434..557 CDD:279046 35/204 (17%)
RICIN 444..559 CDD:238092 34/196 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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