DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and galntl6

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001139074.1 Gene:galntl6 / 568915 ZFINID:ZDB-GENE-090312-115 Length:600 Species:Danio rerio


Alignment Length:598 Identity:206/598 - (34%)
Similarity:296/598 - (49%) Gaps:124/598 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 GEGADGR--PVVVPPRDRFRMQRFFRLNSFNLLASDRIPLNRTLKDYRTPECRDKKYASGLPSTS 153
            |:|..|:  |:|....|    ...::.|.||:..|:.|.|:|:|.|.|.|.|:.|.|...||:||
Zfish    82 GKGEHGKPYPLVEDECD----DSVYKENGFNIYVSNNIALDRSLPDIRHPNCKQKLYLENLPNTS 142

  Fly   154 VIIVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYV----KVLAVPTRI 214
            :||.||||.||.||||:.|:.||:|.||:.|||||||.|||.:||..|..|:    ||     ||
Zfish   143 IIIPFHNEGWSSLLRTLHSISNRTPDHLIAEIILVDDYSDREHLKAHLAEYMSRFPKV-----RI 202

  Fly   215 FRMKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDN 279
            .|.|||.||:..|||||..|||:||||||:|||.:..||.|||.:|.::.|.::||:||:|..::
Zfish   203 VRTKKREGLIRTRLLGASVARGEVLTFLDSHCEANINWLPPLLDQIAQNPKTIVCPMIDVIDHNH 267

  Fly   280 FSY-TKTFENHWGAFNWQLSFRWFSSDRKRQTAGNSSKDSTDPIATPGMAGGLFAIDRKYFYEMG 343
            |.| .:..:...|||:|::.::......:.|     ..|.:||..:|.|||||||::|::|:|:|
Zfish   268 FGYEAQAGDAMRGAFDWEMYYKRIPIPPELQ-----GPDPSDPYQSPVMAGGLFAVNRQWFWELG 327

  Fly   344 SYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAATV 408
            .||:.:.:||||..|:||::|.|||.:...|||.|||::|...||..|.|.|  |..||.|.|..
Zfish   328 GYDTGLEIWGGEQFEISFKVWMCGGSMYDVPCSRVGHIYRKYVPYKVPSGTS--LARNLKRVAET 390

  Fly   409 WMDDWQYFIM--------LYTSGLTLGAKDKVNVTERVALRERLQCKPFSWYLENI-W--PEHFF 462
            |||::..:|.        |.|..|          |.:..||:.|:||.|.||:..: |  |:::.
Zfish   391 WMDEYTEYIYQRRPEYRHLSTGDL----------TAQKELRKHLKCKDFKWYMNTVAWDLPKYYP 445

  Fly   463 PAPDRFFGKIIWLDGETECAQAYSKHMKNLPGRALSREWKRAFEEIDSKAEELMALID------- 520
            |                         ::.||.         |:.||.:.|..|  .:|       
Zfish   446 P-------------------------VEPLPA---------AWGEIRNAASGL--CVDSKHGSTG 474

  Fly   521 --LERDKCLRPLKEDVPRSSLSAVTVGDCTSHAQSMDMFVITPKGQIMTNDNVCLTYRQQKLGVI 583
              |..|.|   |||...|:          .:|.|   :|....:..|...|         .|...
Zfish   475 TELRLDNC---LKEGAERT----------WAHEQ---IFTFGWREDIRPGD---------PLHTR 514

  Fly   584 KMLKNRNATTSNVMLAQC-ASDSSQLWTYDMDTQQISHRDTKLCLTLKAATNSRLQKVEKVVLSM 647
            |...:..:..|.:.|..| ....:|.|:|..| :.:.|..:..|  :..:.|      :|.:...
Zfish   515 KFCFDAISQNSPITLYDCHGMKGNQHWSYRKD-KSLYHLVSSGC--MDCSPN------DKRIFMN 570

  Fly   648 ECDFKDITQKWGF 660
            :||.|..||:|.|
Zfish   571 KCDPKSETQQWIF 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 116/240 (48%)
pp-GalNAc-T 153..457 CDD:133004 140/317 (44%)
Ricin_B_lectin 516..658 CDD:279046 31/151 (21%)
RICIN 524..660 CDD:238092 30/136 (22%)
galntl6NP_001139074.1 pp-GalNAc-T 142..437 CDD:133004 140/316 (44%)
Glyco_tranf_2_2 142..404 CDD:287123 128/273 (47%)
Ricin_B_lectin 453..581 CDD:279046 36/163 (22%)
RICIN 455..583 CDD:238092 36/163 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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