DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and galnt17

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_696189.5 Gene:galnt17 / 567794 ZFINID:ZDB-GENE-110419-5 Length:617 Species:Danio rerio


Alignment Length:401 Identity:163/401 - (40%)
Similarity:231/401 - (57%) Gaps:25/401 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 NINLFQPINGEGADGRPVVVPPRDRFRMQRFFRLN-SFNLLASDRIPLNRTLKDYRTPECRDKKY 145
            ::.|.:...|.|..|.|..:.|.:. :..:|.|.. .:|...||:|.|:|:|.|||..:|:...:
Zfish    99 SLGLIEGFGGRGRGGIPATLTPAEE-KEAKFLREKYGYNAFLSDKISLDRSLPDYRPSKCKKAFF 162

  Fly   146 ASGLPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYV-KVLA 209
            ...||..|:|.:|.|||.||:||::.|.:|.:|.|||||||||||.||...||..||.|| |...
Zfish   163 PRDLPQISIIFIFVNEALSVILRSVHSAVNHTPAHLLKEIILVDDNSDDVQLKGPLEEYVNKRYP 227

  Fly   210 VPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVICPVIDI 274
            ...:|.|.:||.||:.||:.|.:.|.|:|..|.|||.|.:..|.||:||||||:.|.:|.|.||.
Zfish   228 GLIKIVRNQKREGLIRARIEGWKVATGEVTGFFDAHVEFTPAWAEPVLSRIKENHKRIILPSIDN 292

  Fly   275 ISDDNFSYTKTFENHWGAFNWQLSFRWFSSDRKRQTAGNSSKDSTDPIATPGMAGGLFAIDRKYF 339
            |.|:.|...: :||....:||:|...:.|..::....|    |::.||.||.|.|..|.::|:||
Zfish   293 IKDETFELER-YENSGHGYNWELWCMYISPPKQWWDEG----DTSAPIRTPAMIGCSFVVNREYF 352

  Fly   340 YEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPYTFPGGMSEVLTDNLAR 404
            .::|..|:.|.|:||||:|:..|:|.|||.:|:.|||.|.|:.|:..||  ...::.....|..|
Zfish   353 GDLGLLDAGMDVYGGENIELGIRVWLCGGSMEVLPCSRVAHIARTKKPY--HSNIAFHTRRNALR 415

  Fly   405 AATVWMDDWQYFIMLYTS--------GLTLGAKDKVNVTERVALRERLQCKPFSWYLENIWPEHF 461
            .|.||||  ||...:|.:        |:..|     :|:||:|||:|||||.|.|||:||:||..
Zfish   416 VAEVWMD--QYKSNVYLAWNLPMKNHGIDYG-----DVSERLALRKRLQCKSFDWYLDNIYPEMR 473

  Fly   462 FPAPDRFFGKI 472
            ......|:|:|
Zfish   474 RYNNTVFYGEI 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 107/236 (45%)
pp-GalNAc-T 153..457 CDD:133004 136/312 (44%)
Ricin_B_lectin 516..658 CDD:279046
RICIN 524..660 CDD:238092
galnt17XP_696189.5 pp-GalNAc-T 170..469 CDD:133004 136/312 (44%)
Ricin_B_lectin 480..605 CDD:279046 3/5 (60%)
RICIN 482..607 CDD:238092 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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