DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant3 and galnt12

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_688194.1 Gene:galnt12 / 559736 ZFINID:ZDB-GENE-060503-704 Length:578 Species:Danio rerio


Alignment Length:408 Identity:188/408 - (46%)
Similarity:248/408 - (60%) Gaps:31/408 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 HKNIVAHYIGKGDIFGNMTADDYNINLFQPINGEGADGRPVV--VPPRDRFRMQRFFRLNSFNLL 121
            |||:...:: |..::.....|         :|..|..||.|.  :...::...:...:.:..|..
Zfish    47 HKNVDEQFL-KRPVYEKPALD---------VNALGEMGRAVKLDLSGEEKREEEESIKKHQINTY 101

  Fly   122 ASDRIPLNRTLKDYRTPECRDKKY-ASGLPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLKEI 185
            .||||.|:|.|.:...|.||:.|| ...||:|||:|.|:|||||.||||:.||:..||..||.|:
Zfish   102 VSDRISLHRRLAERWNPLCRNLKYDYLSLPTTSVVIAFYNEAWSTLLRTVHSVLETSPDLLLNEV 166

  Fly   186 ILVDDASDRSYLKRQLESYVKVLAVPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHCECSR 250
            |||||.|||.:||..||:|:..|. ..|:.|.:||.|||.||||||..|.|:||||||.||||..
Zfish   167 ILVDDYSDREHLKEPLENYIADLK-KVRLIRARKREGLVRARLLGASIATGEVLTFLDCHCECHE 230

  Fly   251 GWLEPLLSRIKESRKVVICPVIDIISDDNFSYT-KTFENHWGAFNWQLSFRWFS---SDRKRQTA 311
            |||||||.||||....|:|||||:|..:.|.|. ...|...|.|:|:|.|.|.|   .::||::|
Zfish   231 GWLEPLLQRIKEEPSAVVCPVIDVIDWNTFQYLGNPGEPQIGGFDWRLVFTWHSIPEHEQKRRSA 295

  Fly   312 GNSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCS 376
                  :||.:.:|.|||||||:::|||..:|:||:.|.||||||:|.|||||||||.:||.|||
Zfish   296 ------ATDVVRSPTMAGGLFAVNKKYFLYLGTYDTGMEVWGGENLEFSFRIWQCGGSLEIHPCS 354

  Fly   377 HVGHVFRSSTPYTFPGGMSEVLTDNLARAATVWMDDWQYFIMLYTSGLTLGAKDKVNVTERVALR 441
            ||||||....||:....::     |..|||.|||||::......:....|.|..  :||:|..||
Zfish   355 HVGHVFPKKAPYSRNKALA-----NSVRAAEVWMDDFKEVYYHRSPHARLEAYG--DVTDRRKLR 412

  Fly   442 ERLQCKPFSWYLENIWPE 459
            .||:||.|.|:|:||:|:
Zfish   413 MRLRCKDFRWFLDNIYPD 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 136/239 (57%)
pp-GalNAc-T 153..457 CDD:133004 160/307 (52%)
Ricin_B_lectin 516..658 CDD:279046
RICIN 524..660 CDD:238092
galnt12XP_688194.1 pp-GalNAc-T 134..428 CDD:133004 160/307 (52%)
Ricin_B_lectin 440..572 CDD:279046
RICIN 442..574 CDD:238092
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.