DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant3 and galnt8b.1

DIOPT Version :10

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_021331085.2 Gene:galnt8b.1 / 559373 ZFINID:ZDB-GENE-041210-83 Length:629 Species:Danio rerio


Alignment Length:715 Identity:195/715 - (27%)
Similarity:315/715 - (44%) Gaps:202/715 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LYVASIQGGDAEMRHPKPPPKRRSLWPHKNIVAHYIGKGDIFGNMTA-DDYNINLFQPINGEGAD 95
            ||::|:: .:.:.:..|....:::|..|.:::.|.:.|  :..::.| ::..:.:       .::
Zfish    20 LYLSSVK-WEIKTQEEKLQQVQQNLSLHSSLLLHKLDK--LEAHLIAVEESRLKV-------KSE 74

  Fly    96 GRPV--VVPPRDRFRM---------QR----FFRLNSFNLLASDRIPLNRTLKDYRTPECRDKKY 145
            .:|.  :.|..|.|:.         ||    .|:...:|...|||:||:|.|.|.|...|.:::|
Zfish    75 KKPAKKLFPDSDLFKRWSVELSEYEQRKAEDLFQKYGYNAFLSDRLPLDRELPDTRDHRCAEREY 139

  Fly   146 ASGLPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYVKVLAV 210
            ...||:.||::::.:||.||:.|.:.|:|||:|.|||||||||||.|....|:.||..|:..:..
Zfish   140 PPDLPTVSVVLIYLDEALSVIQRAVYSIINRTPAHLLKEIILVDDHSTNEDLQTQLHVYISSINE 204

  Fly   211 P----TRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVICPV 271
            .    .::....::.||..||:.|.:.|.|||:..||||.|....|.||||:||:..|.:|:.||
Zfish   205 KHPGLVKMVTHAEQKGLSQARISGWKAASGDVVAILDAHIEVHVKWAEPLLARIQADRTLVLSPV 269

  Fly   272 IDIISDDNFSYTKTFENHWGAFNWQL-----SF--RWFSSDRKRQTAGNSSKDSTDPIATPGMAG 329
            .|.|:.|:...||.|.:..| |:|.|     :|  :|::.:           |.:.|..:|.:. 
Zfish   270 FDKINYDDLEVTKYFASAHG-FDWALWCMYVTFPKKWYNRN-----------DPSLPGKSPSVM- 321

  Fly   330 GLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFR-------------------------------- 362
            |:..:||.:|.|:|:.|..|:|:||||||:..|                                
Zfish   322 GILVVDRLFFGEIGTLDEGMQVYGGENVELGIRVIHHHTEAFFILLYLHVEQWCCCSLLTFGCVL 386

  Fly   363 --IWQCGGRVEISPCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAATVWMDDWQ------YFIML 419
              :|.|||.:|:.|||.:.|:.|:..|| .| .:|.|:..|..|.|.||||:::      :.:.|
Zfish   387 AQVWLCGGSIEVVPCSKIAHIERAHKPY-MP-DLSNVMKRNALRVAEVWMDEYKKNVYMAWGLPL 449

  Fly   420 YTSGLTLGAKDKVNVTERVALRERLQCKPFSWYLENIWPEHFFPAPDRFFGKIIWLDGETECAQA 484
            ...|:.:|     :::||..||||:.||||.|||||::.|                         
Zfish   450 ENHGIDIG-----DLSERKKLRERMNCKPFKWYLENVYTE------------------------- 484

  Fly   485 YSKHMKNLPGRALSREWKRAFEEIDSKAEELMALI-DLERDKCL--RPLKEDVPRSSLSAVTVGD 546
             ...|.:|.|..                    ||| ||:...||  .|.:|:.|       .:..
Zfish   485 -LNPMDDLLGYG--------------------ALINDLQTGLCLDKGPSEENTP-------ILYP 521

  Fly   547 CTSHAQSMDMFVITPKGQIMTNDNVCLTYRQQKLGVIK-MLKNRNATTSNVMLAQCASDSSQ--- 607
            |  |..:..:|..|..|:|:             :|.:: :|.:||         :|.:|...   
Zfish   522 C--HFLTSQVFFYTTSGEIL-------------VGPLQPLLHSRN---------RCLADPGSGRF 562

  Fly   608 ---LWTYDMDT-----------QQISHRDTKLCLTLKAATNSRLQKVEKVVLSMECDFKDITQKW 658
               .|..|.:.           |.|.:||||.||.:   :..:....:..|...||.    .|.|
Zfish   563 PEFSWCSDTEKPKHMYWDFKQGQAIQNRDTKRCLEI---STKQTGDYKNNVFIQECR----NQHW 620

  Fly   659  658
            Zfish   621  620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 pp-GalNAc-T 153..457 CDD:133004 124/354 (35%)
beta-trefoil_Ricin_Pgant3-like 515..661 CDD:467338 37/165 (22%)
galnt8b.1XP_021331085.2 None

Return to query results.
Submit another query.