DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and galnt13

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_031748551.1 Gene:galnt13 / 550031 XenbaseID:XB-GENE-1012445 Length:571 Species:Xenopus tropicalis


Alignment Length:545 Identity:245/545 - (44%)
Similarity:326/545 - (59%) Gaps:81/545 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 GEGADGRPVVVPPRDRFRMQRFFRLNSFNLLASDRIPLNRTLKDYRTPECRDKKYASGLPSTSVI 155
            |.|..|:.|::|..|:.:|:..|::|.|||:|||.|.|||:|.|.|...|:.|.|...||:||::
 Frog    56 GPGELGKAVIIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRLEGCKTKVYPDELPNTSIV 120

  Fly   156 IVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYVKVLAVPTRIFRMKKR 220
            |||||||||.||||:.|||||||..|:.|||||||:|:|.:||..||:|||.|.||.:|.||::|
 Frog   121 IVFHNEAWSTLLRTVHSVINRSPHRLISEIILVDDSSERDFLKSPLENYVKHLEVPVKILRMEQR 185

  Fly   221 SGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFSYTKT 285
            |||:.|||.||..|:|.::|||||||||:.|||||||:||||.||.|:||:||:||||.|.|...
 Frog   186 SGLIRARLRGANVAKGQIITFLDAHCECTIGWLEPLLARIKEDRKTVVCPIIDVISDDTFEYMAG 250

  Fly   286 FENHWGAFNWQLSFRWF-----SSDRKRQTAGNSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSY 345
            .:..:|.|||:|:|||:     ..||::       .|.|.|:.||.||||||:||:.||.|:|:|
 Frog   251 SDMTYGGFNWKLNFRWYPVPQREMDRRK-------GDRTLPVRTPTMAGGLFSIDKTYFEELGTY 308

  Fly   346 DSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAATVWM 410
            ||.|.:|||||:|||||||||||.:||..|||||||||.:||||||||...|:..|..|.|.|||
 Frog   309 DSGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATPYTFPGGTGHVINKNNRRLAEVWM 373

  Fly   411 DDWQYFIMLYTSGLTLGAKDKVNVTERVALRERLQCKPFSWYLENIWPEHFFPAPDRFFGKIIWL 475
            ||::.|..:.:.|:.  ..|..:|:||.||||.|:|.|||||||.::|:.  ..|.|:|      
 Frog   374 DDFKDFFYIISPGVV--KVDYGDVSERKALRENLKCNPFSWYLETVYPDS--QIPRRYF------ 428

  Fly   476 DGETECAQAYSKHMKNLPGRALSREWKRAFEEIDSKAEELMALIDLERDKCLRPLKEDVPRSSLS 540
                                                  .|..:.::|.::||    :::.|....
 Frog   429 --------------------------------------SLGEIRNVETNQCL----DNMGRKENE 451

  Fly   541 AVTVGDCTSHAQ-SMDMFVITPKGQIMTNDNVCLTYRQQKLGVIKMLKNRNATTSNVMLAQCASD 604
            .|.:.:|  |.. ...:|..|...:|.| |::||...:.. |.:.|||..:..            
 Frog   452 KVGIFNC--HGMGGNQVFSYTADKEIRT-DDLCLDVSRLN-GPVIMLKCHHMR------------ 500

  Fly   605 SSQLWTYDMDTQQISHRDTKLCLTL 629
            .:|||.||.:|....|..|:.||||
 Frog   501 GNQLWEYDAETHTFLHIITQSCLTL 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 148/240 (62%)
pp-GalNAc-T 153..457 CDD:133004 182/308 (59%)
Ricin_B_lectin 516..658 CDD:279046 30/115 (26%)
RICIN 524..660 CDD:238092 29/107 (27%)
galnt13XP_031748551.1 pp-GalNAc-T 118..418 CDD:133004 182/308 (59%)
Ricin_B_lectin 431..548 CDD:395527 30/115 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D194016at33208
OrthoFinder 1 1.000 - - FOG0002015
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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