DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and Galnt4

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001020224.2 Gene:Galnt4 / 500826 RGDID:1564589 Length:578 Species:Rattus norvegicus


Alignment Length:679 Identity:248/679 - (36%)
Similarity:332/679 - (48%) Gaps:122/679 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLRFQQLKKLWLLYLFLLFFAFFMFAISIN-LYVASIQGGDAEMRHPKPPPKRRSLWPHKNIVA 64
            |.:|:....|..|| |.||..|:.:...|:: ||.:|  |.|          :.|.|.| :.:..
  Rat     1 MAVRWTWAGKSCLL-LALLTLAYILVEFSVSTLYASS--GAD----------RARELGP-RRLSD 51

  Fly    65 HYIGKGD----IFGNMTADDYNINLFQPINGEGADGRPVVVPPRDRFRMQRFFRLNSFNLLASDR 125
            |...:.|    ::....||.:.:       ||......:.:...:..:.:......:.|:..|||
  Rat    52 HETREEDLSQPLYKKPPADSHAL-------GEWGRASKLQLDEGELKQQEELIERYAINIYLSDR 109

  Fly   126 IPLNRTLKDYRTPECRDKKY-ASGLPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLKEIILVD 189
            |.|:|.::|.|..||:.||: ...||:|||||.|:|||||.|||||.||:..||..|||||||||
  Rat   110 ISLHRHIEDKRMYECKAKKFHYRSLPTTSVIIAFYNEAWSTLLRTIHSVLETSPAVLLKEIILVD 174

  Fly   190 DASDRSYLKRQLESYVKVLAVPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLE 254
            |.|||.|||.|||:|:..|. ..|:.|..||.|||.|||:||..|.||||||||.||||:.||||
  Rat   175 DLSDRIYLKAQLEAYISNLD-RVRLIRTNKREGLVRARLIGATFATGDVLTFLDCHCECNTGWLE 238

  Fly   255 PLLSRIKESRKVVICPVIDIISDDNFS-YTKTFENHWGAFNWQLSFRWFS---SDRKRQTAGNSS 315
            |||.||......::|||||.|..:.|. |.:|.|...|.|:|:|:|:|.|   .:|.|:|:    
  Rat   239 PLLERISRDETAIVCPVIDTIDWNTFEFYMQTGEPMIGGFDWRLTFQWHSVPKHERDRRTS---- 299

  Fly   316 KDSTDPIATPGMAGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGH 380
              ..|||.:|.|||||||:.:|||..:|:||:.|.||||||:|:|||:|||||::||.|||||||
  Rat   300 --RIDPIRSPTMAGGLFAVSKKYFQYLGTYDTGMEVWGGENLELSFRVWQCGGKLEIHPCSHVGH 362

  Fly   381 VFRSSTPYTFPGGMSEVLTDNLARAATVWMDDW-QYFIMLYTSGLTLGAKDKVNVTERVALRERL 444
            ||....||..|.     ...|.||||.|||||: ::|   |........:...:::||..|||||
  Rat   363 VFPKRAPYARPN-----FLQNTARAAEVWMDDYKEHF---YNRNPPARKETYGDISERKLLRERL 419

  Fly   445 QCKPFSWYLENIWPEHFFPAPDRFFGKIIWLDGETECAQAYSKHMKNLPGRALSREWKRAFEEID 509
            |||.|.|||:|::.....| .||                         ||      |..|...:.
  Rat   420 QCKSFDWYLKNVFSNLHVP-EDR-------------------------PG------WHGAIRSMG 452

  Fly   510 SKAEELMALIDLERDKCLRPLKEDVPRSSLSAVTVGDCTSHAQSMDMFV-ITPKGQIMTND--NV 571
            ..:|            |   |..:.|.::.:...:.....|.|..:.|. .|...:|..|.  .:
  Rat   453 ISSE------------C---LDYNAPDNNPTGANLSLFGCHGQGGNQFFEYTSNKEIRFNSVTEL 502

  Fly   572 CLTYRQQKLGVIKMLKNRNATTSNVMLAQCASDS-----SQLWTYDMDTQQISHRDTKLCLTLKA 631
            |....|||              ..|.:..|..|.     :.:|.:..| ..|.|..|:|||:...
  Rat   503 CAEVPQQK--------------DYVGMQNCPKDGLPIPVNIIWHFKED-GTIFHPHTRLCLSAYR 552

  Fly   632 ATNSRLQKVEKVVLSMECDFKDITQKWGF 660
            ..:.|     ..|....||..|..|.|.|
  Rat   553 TADGR-----PSVQMKTCDALDKNQIWRF 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 140/239 (59%)
pp-GalNAc-T 153..457 CDD:133004 168/308 (55%)
Ricin_B_lectin 516..658 CDD:279046 30/149 (20%)
RICIN 524..660 CDD:238092 31/143 (22%)
Galnt4NP_001020224.2 WcaA 133..430 CDD:223539 170/311 (55%)
pp-GalNAc-T 138..432 CDD:133004 168/308 (55%)
RICIN 446..576 CDD:238092 33/164 (20%)
Ricin_B_lectin 446..574 CDD:279046 32/162 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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