DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and galnt6

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_998361.1 Gene:galnt6 / 406477 ZFINID:ZDB-GENE-040426-2272 Length:619 Species:Danio rerio


Alignment Length:559 Identity:223/559 - (39%)
Similarity:305/559 - (54%) Gaps:89/559 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 GADGRPV----VVPPRDRFRMQRFFRLNSFNLLASDRIPLNRTL-KDYRTPECRDKKY--ASGLP 150
            ||||.|.    :....::.:.:...| :.||..|||||.|:||| .|.|.|||.|:|:  ...||
Zfish   109 GADGVPFQYDRMTKEEEKEKQEGMTR-HCFNQFASDRISLHRTLGDDTRPPECVDRKFRRCPALP 172

  Fly   151 STSVIIVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYVKVLAVPTRIF 215
            :|||||||||||||.||||:.||::.||...|||||:|||||...:|..:||.|||.|.: .::.
Zfish   173 TTSVIIVFHNEAWSTLLRTVYSVLHTSPAAFLKEIIMVDDASTAEHLHGKLEEYVKALKI-VKVV 236

  Fly   216 RMKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNF 280
            |..:|.||:.||||||..|.|::||||||||||..|||||||:||.|....|:.|.|..|..:.|
Zfish   237 RQPERKGLITARLLGASKAEGEILTFLDAHCECFHGWLEPLLARIVEEPTAVVSPEITTIDLNTF 301

  Fly   281 SYTK---TFENH-WGAFNWQLSFRWFS----SDRKRQTAGNSSKDSTDPIATPGMAGGLFAIDRK 337
            .:.|   |...| .|.|:|.|:|.|..    .:.||       ||.|.|:.||..|||||:|.:.
Zfish   302 QFHKPVATARAHNRGNFDWSLTFGWEGIPDYENAKR-------KDETYPVKTPTFAGGLFSISKA 359

  Fly   338 YFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPYTFPGGMSEVLTDNL 402
            ||.::|:||..|.:|||||||||||:|||||::||.|||.||||||:.:|:|||.| :||:|.|.
Zfish   360 YFEKIGTYDDKMEIWGGENVEMSFRVWQCGGQLEIIPCSVVGHVFRTKSPHTFPKG-TEVITRNQ 423

  Fly   403 ARAATVWMDDWQYFIMLYTSGLTLGAKDK--VNVTERVALRERLQCKPFSWYLENIWPEHFFP-- 463
            .|.|.|||||::......:......||:|  .::::|:.|||.||||.|||||.|::||.|.|  
Zfish   424 VRLAEVWMDDYKLIFYRRSQSAAKMAKEKGFGDISDRLKLREDLQCKNFSWYLSNVYPEAFVPDL 488

  Fly   464 APDRFFGKIIWLDGETECAQA------------YSKHMKNLPGRALSREWKRAFEEIDSKAEELM 516
            :|.:|  ..:...|..:|...            |:.|  |:.|       .:.||....|  ||.
Zfish   489 SPVKF--GALKNRGAQQCLDVGESNNGGKPVIMYTCH--NMGG-------NQYFEYTSHK--ELR 540

  Fly   517 ALIDLERDKCLR--PLKEDVPRSSLSAVTVGDCTSHAQSMDMFVITPKGQIMTNDNVCLTYRQQK 579
            .  ::.:..||:  |..|.|                  .:::..:..||..:..:...|...:| 
Zfish   541 H--NIGKQLCLQASPYPEPV------------------KIELCTLKGKGSSLAPEQEWLITEEQ- 584

  Fly   580 LGVIKMLKNRNA------TTSNVMLAQC-ASDSSQLWTY 611
                 :|||.::      ....::::.| ..|..|.|.:
Zfish   585 -----LLKNPSSGKCLHKKGDKILMSPCNPDDHHQQWAF 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 132/243 (54%)
pp-GalNAc-T 153..457 CDD:133004 163/313 (52%)
Ricin_B_lectin 516..658 CDD:279046 16/105 (15%)
RICIN 524..660 CDD:238092 16/97 (16%)
galnt6NP_998361.1 pp-GalNAc-T 175..480 CDD:133004 163/313 (52%)
Ricin_B_lectin 493..616 CDD:279046 27/161 (17%)
RICIN 494..618 CDD:238092 27/160 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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