DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and CG7579

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_648799.1 Gene:CG7579 / 39714 FlyBaseID:FBgn0036528 Length:498 Species:Drosophila melanogaster


Alignment Length:566 Identity:165/566 - (29%)
Similarity:244/566 - (43%) Gaps:128/566 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 FNLLASDRIPLNRTLKDYRTPECRDKKYASGLPST-SVIIVFHNEAWSVLLRTITSVINRSPRHL 181
            :|...|:||||.|||:|||.|:|....|:|....| |::|....|....|||.|.|||.::..:|
  Fly    18 YNAWLSERIPLKRTLEDYRDPQCLKINYSSEKTVTVSIVIAIQQEHPHTLLRGIYSVITQTSPYL 82

  Fly   182 LKEIILVDDASDRSYLKRQLESYVKVLAVPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHC 246
            ||||:||.|......|.|.:...:.::..    ..|:...|::.|||.||..|.||:|.||:.|.
  Fly    83 LKEIVLVHDGHPDLDLIRHIHHKLPIVIQ----LEMESSKGIIHARLTGAGVATGDILVFLNGHM 143

  Fly   247 ECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFSYTKTFENHWGAFNWQLSFRWFSSDRKRQTA 311
            |.:||||.|||..|..:.:.|..|::|.||.::|:|.|..|....||:|||...:...|:     
  Fly   144 EVTRGWLPPLLEPILLNNQTVTEPIVDAISRESFAYRKLVEPEQLAFDWQLDHIFLPLDQ----- 203

  Fly   312 GNSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCS 376
             :|......|..:..:.|.:||||||:|:.:|.:|..:|.:||:.:|:|.::|||||.:...|||
  Fly   204 -HSWNSLPKPYPSSQLEGRVFAIDRKWFWHLGGWDEGLRDYGGDALELSLKVWQCGGLILAVPCS 267

  Fly   377 HVGHVFR------SSTPYTFPGGMSEVLTDNLARAATVWMDDWQYFIMLYT---SGLTLGAKDKV 432
            .||.:::      ...|...|   |..:..|..|...||:|:::.....|.   ..||..:.||.
  Fly   268 RVGIIYKRDELEAQMAPNRNP---SLQVQKNFKRVVDVWLDEYKLHFYRYNPKLRNLTAESLDKP 329

  Fly   433 NVTERVALRERLQCKPFSWYLENIWPE---HFFPA-----PDRFFGKIIWLDGETECAQAYSKHM 489
            .     .||.||.||.|.||...:.|:   ||..|     |   .|||:         ...:.|.
  Fly   330 R-----DLRRRLNCKSFEWYRSQVAPQIRNHFLHAGLTNYP---IGKIM---------PFVAPHF 377

  Fly   490 KNLPGRALSREWKRAFEEIDSKAEELMALIDLERDKCLRPLKEDVPRSSLSAVTVGDCTSHAQSM 554
                                                || .:|...|       .:..|  |:.:.
  Fly   378 ------------------------------------CL-SIKGGFP-------VIRKC--HSTNF 396

  Fly   555 DMFVITPKGQIMTNDNVCL--TYRQQKLGVIKMLKNRNATTSNVMLAQCASD-SSQLWTYDMDTQ 616
            :.:.:|.:.| :.:.|:||  .|:                 :||...:|... |...|.|:....
  Fly   397 EDWTLTSRCQ-LKHGNMCLDVDYK-----------------NNVRATKCTKKLSKNPWHYNYQHS 443

  Fly   617 QISHRDTKLCLTLKAATNSRLQKVEKVVLSME-CDFKDIT-QKWGF 660
            .......| ||.:         .|.||.|.:. || .|:| |:|.|
  Fly   444 SFVSNGNK-CLQI---------DVNKVGLILSACD-SDVTEQRWMF 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 86/242 (36%)
pp-GalNAc-T 153..457 CDD:133004 107/312 (34%)
Ricin_B_lectin 516..658 CDD:279046 30/146 (21%)
RICIN 524..660 CDD:238092 31/140 (22%)
CG7579NP_648799.1 WcaA 52..336 CDD:223539 101/301 (34%)
pp-GalNAc-T 54..349 CDD:133004 107/312 (34%)
RICIN 367..478 CDD:238092 35/194 (18%)
Ricin_B_lectin 373..476 CDD:279046 31/177 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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