DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and Galnt16

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001094333.1 Gene:Galnt16 / 362760 RGDID:1310202 Length:558 Species:Rattus norvegicus


Alignment Length:553 Identity:187/553 - (33%)
Similarity:272/553 - (49%) Gaps:85/553 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 FRLNSFNLLASDRIPLNRTLKDYRTPECRDKKYASGLPSTSVIIVFHNEAWSVLLRTITSVINRS 177
            :|.::||.|.||::..:|.::|.|...|....|:|.||:|||||.|||||.|.||||:.||:||:
  Rat    86 YRQHAFNQLESDKLSPDRPIRDTRHYSCPSLSYSSDLPATSVIITFHNEARSTLLRTVKSVLNRT 150

  Fly   178 PRHLLKEIILVDDASDRSYLKRQLESYVKVLAVP-TRIFRMKKRSGLVPARLLGAENARGDVLTF 241
            |..|::|||||||.|.      ..|..:.:..:| .:..|..||.||:.:|:.||:.|...||||
  Rat   151 PAGLIQEIILVDDFSS------DPEDCLLLTRIPKVKCLRNDKREGLIRSRVRGADVAGASVLTF 209

  Fly   242 LDAHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFSYTKTFENHWGAFNWQLSFRWFSSDR 306
            ||:|||.:..||:|:|.|:.|....|:.|:||:||.|||:|.....:..|.|:|.|.|:|.....
  Rat   210 LDSHCEVNVEWLQPMLQRVMEDHTRVVSPIIDVISLDNFAYLAASADLRGGFDWSLHFKWEQIPL 274

  Fly   307 KRQTAGNSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVE 371
            :::.   :..|.|.||.||.:|||:|.||:.:|..:|.||:.|.:|||||.|:|||:|.|||.:|
  Rat   275 EQKM---TRTDPTKPIRTPVIAGGIFVIDKSWFNHLGKYDAQMDIWGGENFELSFRVWMCGGSLE 336

  Fly   372 ISPCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAATVWMDDW-QYFIMLYTSGLTLGAKDKVNVT 435
            |.|||.||||||...||.||.|.:.....|..|.|.||||:: ||:.....|.:   .|...:|.
  Rat   337 IVPCSRVGHVFRKRHPYNFPEGNALTYIRNTKRTAEVWMDEYKQYYYEARPSAI---GKAFGSVA 398

  Fly   436 ERVALRERLQCKPFSWYLENIWPEHFFPAPDRFFGKIIWLDGETECAQAYSKHMKNLPGRALSRE 500
            .|:..|:::.||.|.|||||::||...|..:...|.|                            
  Rat   399 TRIEQRKKMDCKSFRWYLENVYPELTVPVKEVLPGVI---------------------------- 435

  Fly   501 WKRAFEEIDSKAEELMALIDLERDKCLRPLKEDVPRSSLSAVTVGDCTSHAQSMDMFVITPKGQI 565
             |:....::|:.:....  ||                   .:.:|.|...|:|      .|..|.
  Rat   436 -KQGVNCLESQGQNTAG--DL-------------------LLGMGICRGSAKS------PPPAQA 472

  Fly   566 MTNDNVCLTYRQQKLGVIKMLKNRNATTSNVMLAQC-ASDSSQLWTYDMDTQQISHRDTKLCLTL 629
            ....:..:..:.:.|.....|  .::..|.|:|..| ..:..|.|.  .....|.|..:.|||..
  Rat   473 WLFSDHLIQQQGKCLAATSTL--MSSPGSPVVLQSCNPKEGKQKWR--RKGSFIQHSVSGLCLET 533

  Fly   630 KAATNSRLQKVEKVVLSMECDFKDITQKWGFIP 662
            |.|.          :::.:|......|:|..:|
  Rat   534 KPAQ----------LVTNKCQADAQAQQWQLLP 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 113/236 (48%)
pp-GalNAc-T 153..457 CDD:133004 138/305 (45%)
Ricin_B_lectin 516..658 CDD:279046 25/142 (18%)
RICIN 524..660 CDD:238092 24/136 (18%)
Galnt16NP_001094333.1 pp-GalNAc-T 126..420 CDD:133004 138/305 (45%)
WcaA 126..>222 CDD:223539 49/101 (49%)
Ricin_B_lectin 441..543 CDD:279046 24/142 (17%)
RICIN 441..543 CDD:238092 24/142 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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