DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and Galnt13

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_017447163.1 Gene:Galnt13 / 311039 RGDID:735044 Length:571 Species:Rattus norvegicus


Alignment Length:656 Identity:269/656 - (41%)
Similarity:360/656 - (54%) Gaps:131/656 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LWLLY-LFLLFFAFFMFAISINLYVASIQGGDAEMRHPKPPPKRRSLWPHKNIVAHYIGKGDIFG 74
            :|:|. :|||            ||.:.....|.:        |.|||.|....|        |..
  Rat    16 MWVLVDVFLL------------LYFSECNKCDDK--------KERSLLPALRAV--------ISR 52

  Fly    75 NMTADDYNINLFQPINGEGADGRPVVVPPRDRFRMQRFFRLNSFNLLASDRIPLNRTLKDYRTPE 139
            |.             .|.|..|:.|::|..|:.:|:..|::|.|||:|||.|.|||:|.|.|...
  Rat    53 NQ-------------EGPGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRLEG 104

  Fly   140 CRDKKYASGLPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESY 204
            |:.|.|...||:|||:|||||||||.||||:.|||||||.:||.|:|||||||:|.:||..||:|
  Rat   105 CKTKVYPDELPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENY 169

  Fly   205 VKVLAVPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVIC 269
            ||.|.||.:|.||::||||:.|||.||..::|.|:|||||||||:.|||||||:||||.||.|:|
  Rat   170 VKTLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKTVVC 234

  Fly   270 PVIDIISDDNFSYTKTFENHWGAFNWQLSFRWF-----SSDRKRQTAGNSSKDSTDPIATPGMAG 329
            |:||:||||.|.|....:..:|.|||:|:|||:     ..||::       .|.|.|:.||.|||
  Rat   235 PIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRK-------GDRTLPVRTPTMAG 292

  Fly   330 GLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPYTFPGGM 394
            |||:|||.||.|:|:||:.|.:|||||:|||||||||||.:||..|||||||||.:||||||||.
  Rat   293 GLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATPYTFPGGT 357

  Fly   395 SEVLTDNLARAATVWMDDWQYFIMLYTSGLTLGAKDKVNVTERVALRERLQCKPFSWYLENIWPE 459
            ..|:..|..|.|.||||:::.|..:.:.|:.  ..|..:|:.|..|||.|:|||||||||||:|:
  Rat   358 GHVINKNNRRLAEVWMDEFKDFFYIISPGVV--KVDYGDVSVRKTLRENLKCKPFSWYLENIYPD 420

  Fly   460 HFFPAPDRFFGKIIWLDGETECAQAYSKHMKNLPGRALSREWKRAFEEIDSKAEELMALIDLERD 524
            .  ..|.|::                                            .|..:.::|.:
  Rat   421 S--QIPRRYY--------------------------------------------SLGEIRNVETN 439

  Fly   525 KCLRPLKEDVPRSSLSAVTVGDCTSHAQ-SMDMFVITPKGQIMTNDNVCLTYRQQKLGVIKMLKN 588
            :||    :::.|.....|.:.:|  |.. ...:|..|...:|.| |::||...:.. |.:.|||.
  Rat   440 QCL----DNMGRKENEKVGIFNC--HGMGGNQVFSYTADKEIRT-DDLCLDVSRLS-GPVIMLKC 496

  Fly   589 RNATTSNVMLAQCASDSSQLWTYDMDTQQISHRDTKLCLTL-KAATNSRLQKVEKVVLSMECDFK 652
            .:..            .:|||.||.:|..:.|..|:.||:: |.|..|:       .|:||....
  Rat   497 HHMR------------GNQLWEYDAETHTLVHIITQSCLSMGKVADGSQ-------HLTMETCND 542

  Fly   653 DITQKW 658
            ...|||
  Rat   543 STLQKW 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 150/240 (63%)
pp-GalNAc-T 153..457 CDD:133004 183/308 (59%)
Ricin_B_lectin 516..658 CDD:279046 35/143 (24%)
RICIN 524..660 CDD:238092 36/137 (26%)
Galnt13XP_017447163.1 pp-GalNAc-T 118..418 CDD:133004 183/308 (59%)
Ricin_B_lectin 431..548 CDD:395527 35/143 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D194016at33208
OrthoFinder 1 1.000 - - FOG0002015
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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