DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and Galnt2

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_038953584.1 Gene:Galnt2 / 292090 RGDID:1310692 Length:570 Species:Rattus norvegicus


Alignment Length:643 Identity:228/643 - (35%)
Similarity:315/643 - (48%) Gaps:127/643 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LFLLFFAFFMFAISINLYVASIQGGDA---------------EMRHPK-----------PPPKRR 54
            |::|..|::|::...:...|.  ||.|               ::.|.:           ||.|.|
  Rat    14 LWVLGIAYYMYSGGGSALAAG--GGGAGRKGDWNDIDSIKKKDLHHSRGDEKAQSMETLPPGKVR 76

  Fly    55 SLWPHKNIVAHYIGKGDIFGNMTADDYNINLFQPINGEGADGRPVVVPPRDRFRMQRFFRLNSFN 119
              ||..|..| |:|     |.|..             .|.|       |..|         |.||
  Rat    77 --WPDFNQEA-YVG-----GTMVR-------------SGQD-------PYAR---------NKFN 104

  Fly   120 LLASDRIPLNRTLKDYRTPECRDKKYASGLPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLKE 184
            .:.||::.::|::.|.|..:|:.|::...||:|||:|.|||||.|.||||:.||:.|||.||:||
  Rat   105 QVESDKLRMDRSIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKRSPPHLIKE 169

  Fly   185 IILVDDASDRSYLKRQLESYVKVLAVPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHCECS 249
            ||||||.|:.......|....||     |:.|..:|.||:.:|:.||:.|:..||||||:||||:
  Rat   170 IILVDDYSNDPEDGALLGKIEKV-----RVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECN 229

  Fly   250 RGWLEPLLSRIKESRKVVICPVIDIISDDNFSYTKTFENHWGAFNWQLSFRW--FSSDRKRQTAG 312
            ..||||||.|:.|.|..|:.|:||:|:.|||.|.....:..|.|:|.|.|:|  .:.:::|...|
  Rat   230 ERWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQG 294

  Fly   313 NSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSH 377
            |    ...||.||.:|||||.:|:.||.|:|.||..|.||||||:|:|||:|||||.:||.|||.
  Rat   295 N----PVAPIKTPMIAGGLFVMDKLYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSR 355

  Fly   378 VGHVFRSSTPYTFPGGMSEVLTDNLARAATVWMDDWQYFIMLYTSGLTLGAKDKVNVTERVALRE 442
            ||||||...|||||||...|...|..|||.||||::::|  .|.:..:.......|:..|:.||:
  Rat   356 VGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEFKHF--YYAAVPSARNVPYGNIQSRLELRK 418

  Fly   443 RLQCKPFSWYLENIWPEHFFP-APDRFFGKIIWLDGETECAQA-----------YSKHMKNLPGR 495
            :|.||||.|||:|::||...| ..|..||.   |...|.|...           |..|  |..| 
  Rat   419 KLGCKPFKWYLDNVYPELRVPDHQDIAFGA---LQQGTNCLDTLGHFADGVVGIYECH--NAGG- 477

  Fly   496 ALSREWKRAFEEIDSKAEELMALIDLERDKCLRPLKEDVPRSSLSAVTVGDCTSHAQSMDMFVIT 560
              ::||....|    |:.:.|       |.||..    |.||..|.:.:..|..:........|.
  Rat   478 --NQEWALTKE----KSVKHM-------DLCLTV----VDRSPGSLIRLQGCRENDSRQKWEQIE 525

  Fly   561 PKGQIM-TNDNVCLTYRQQKLGVIKMLKNRNATTSNVMLAQCASDSSQLWTYDMDTQQ 617
            ...::. ...|:|             |.:|.|.:..:.:..|....||.|.:.::.||
  Rat   526 GNSKLRHVGSNLC-------------LDSRTAKSGGLSVEVCGPALSQQWKFSLNLQQ 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 123/237 (52%)
pp-GalNAc-T 153..457 CDD:133004 152/305 (50%)
Ricin_B_lectin 516..658 CDD:279046 21/103 (20%)
RICIN 524..660 CDD:238092 20/95 (21%)
Galnt2XP_038953584.1 pp-GalNAc-T 138..433 CDD:133004 152/305 (50%)
Ricin_B_lectin 445..562 CDD:395527 31/152 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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