DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant3 and Galnt5

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_766443.2 Gene:Galnt5 / 241391 MGIID:2179403 Length:930 Species:Mus musculus


Alignment Length:633 Identity:216/633 - (34%)
Similarity:321/633 - (50%) Gaps:140/633 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 HKNIV----AHYIGKGDIFGNMTADDYNINLFQPINGEGADGRPVVVPPRDRFRMQRFFRLNSFN 119
            |.||.    .|::.:.|:  .::..|        :|..|..||||||||..:...::.::..:||
Mouse   401 HANIPENPGMHHVFRIDV--TLSPRD--------LNAPGQFGRPVVVPPEKKKEAEQRWKEGNFN 455

  Fly   120 LLASDRIPLNRTLKDYRTPECRDKKYASGLPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLKE 184
            :..||.||::|.::|.|...|.::...:.||:||:|:.|.:|.||.|||::.||:||||.||:||
Mouse   456 VYLSDLIPVDRAIEDTRPAGCAEQLVHNDLPTTSIIMCFVDEVWSALLRSVHSVLNRSPPHLIKE 520

  Fly   185 IILVDDASDRSYLKRQLESYVKVLAVPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHCECS 249
            |:||||.|.:.|||..|:.|:.... ..||.|:|:|.||:.|||.||:||.||||||||:|.||:
Mouse   521 ILLVDDFSTKEYLKADLDKYMSQFP-KVRILRLKERHGLIRARLAGAQNATGDVLTFLDSHVECN 584

  Fly   250 RGWLEPLLSRIKESRKVVICPVIDIISDDNFSYTKTFENHWGAFNWQLSFRWFSSDRKRQTAGNS 314
            .|||||||.|:..:||.|.||||::|:|.:.||........|.|.|.::|.| .:......|.|.
Mouse   585 VGWLEPLLERVYLNRKKVACPVIEVINDKDMSYMTVDNFQRGVFTWPMNFGW-KTIPPDVVAKNG 648

  Fly   315 SKDSTDPIATPGMAGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVG 379
            .|: ||.|..|.||||||:||:.||||:|:||..:.||||||:|:||::|.|||.:||.|||.||
Mouse   649 IKE-TDIIRCPVMAGGLFSIDKSYFYELGTYDPGLDVWGGENMELSFKVWMCGGEIEIIPCSRVG 712

  Fly   380 HVFRSSTPYTFPGGMSEVLTDNLARAATVWMDDWQYFIM-----LYTSGLTLGAKDKVNVTERVA 439
            |:||:..||:||....:.:..||.|.|.||:||::....     |...||.:|     |:|::..
Mouse   713 HIFRNDNPYSFPKDRMKTVERNLVRVAEVWLDDYRELFYGHGDHLIDQGLDVG-----NLTQQRE 772

  Fly   440 LRERLQCKPFSWYLENIWPEHFFPAPDRFFGKIIWLDGETECAQAYSKHMKNLPGRALSREWKRA 504
            ||::|:||.|.|||:|::|                                              
Mouse   773 LRKKLKCKSFKWYLDNVFP---------------------------------------------- 791

  Fly   505 FEEIDSKAEELMA---LIDLERDKCLRPLKEDVPRSSLSAVTVGDCTSHAQSMDMFVITPKGQIM 566
                |.||..:.|   ||::...||:.  .|::      .||:.||...:| :..|..|      
Mouse   792 ----DLKAPVVRASGVLINMALGKCVS--IENI------TVTLEDCDGSSQ-LQQFNYT------ 837

  Fly   567 TNDNVCLTYRQQKLGVIKMLKNRNATTSNVMLAQCASDSSQLWTYDMDTQQISHRDTKLCLTLKA 631
                           .::::|:.....:.:      .:...|..|..|     :|:.:|....|:
Mouse   838 ---------------WVRLIKHGEWCVAPI------PEKGSLTLYHCD-----NRNNRLKWLHKS 876

  Fly   632 ATNSRLQKVEKVV-------LSME------------CDFKDITQKWGF 660
            |:....:.|:.:|       |.||            |:..::.|||.|
Mouse   877 ASAFHPELVDHIVFENYQQLLCMEGNFSQKTLKLAACNPMELQQKWKF 924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 126/235 (54%)
pp-GalNAc-T 153..457 CDD:133004 152/308 (49%)
Ricin_B_lectin 516..658 CDD:279046 28/163 (17%)
RICIN 524..660 CDD:238092 27/154 (18%)
Galnt5NP_766443.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..209
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..381
Catalytic subdomain A 485..594 65/109 (60%)
pp-GalNAc-T 489..790 CDD:133004 152/308 (49%)
Catalytic subdomain B 654..716 38/61 (62%)
RICIN 805..925 CDD:214672 29/161 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.