DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and gly-10

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001041036.2 Gene:gly-10 / 178343 WormBaseID:WBGene00001635 Length:703 Species:Caenorhabditis elegans


Alignment Length:692 Identity:212/692 - (30%)
Similarity:323/692 - (46%) Gaps:122/692 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGL-RFQQLKKLWLL-YLFLLFFAFFMFAISINLYVAS-------------IQGGDAEMRHPKPP 50
            ||| |:...:..|:: |..||.|.:.:::     |||:             .||...:..:|.||
 Worm    82 MGLSRYLSRRHHWVIQYCGLLLFLYLIYS-----YVATSNDGPNLHEDIPVFQGQGKDRANPNPP 141

  Fly    51 PK--RRSLWPHKNIVAHYIGKGDIFGNMTADDYNINLFQPINGEGADGRPVVVPPRDRFRMQ--R 111
            ..  ..:|.|.:....|...|.:       |:......:...|.|..|:||.:|.......:  .
 Worm   142 AALGDEALDPFEKYRGHEKIKWE-------DEAAYEKEKRREGPGEWGKPVKLPEDKEVEKEALS 199

  Fly   112 FFRLNSFNLLASDRIPLNRTLKDYRTPECRDKKYASGLPSTSVIIVFHNEAWSVLLRTITSVINR 176
            .::.|.:|...||.|.|||::||.|..||::..|::.||:.|||..||.|..|.|||::.|||||
 Worm   200 LYKANGYNAYISDMISLNRSIKDIRHKECKNMMYSAKLPTVSVIFPFHEEHNSTLLRSVYSVINR 264

  Fly   177 SPRHLLKEIILVDDASDRSYLKRQLESYVKVLAVP--TRIFRMKKRSGLVPARLLGAENARGDVL 239
            ||..||||||||||.|::..|::.||.::|...:.  .::.|.|||.||:..|.|||::|.|::|
 Worm   265 SPPELLKEIILVDDFSEKPALRQPLEDFLKKNKIDHIVKVLRTKKREGLIRGRQLGAQDATGEIL 329

  Fly   240 TFLDAHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFSYTKTFENHWGAFNWQLSFRWFSS 304
            .|||||.|.:..||.|||..|.|..:.|:||.:|:|..:.:......|...|:|:|..::     
 Worm   330 IFLDAHSEANYNWLPPLLDPIAEDYRTVVCPFVDVIDCETYEVRPQDEGARGSFDWAFNY----- 389

  Fly   305 DRKRQTAGNSSKDS-TDPIATPGMAGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGG 368
              ||.......::| |.|..:|.||||.|||..|:|:|:|.||..:.:||||..|:||::|||.|
 Worm   390 --KRLPLTKKDRESPTKPFNSPVMAGGYFAISAKWFWELGGYDEGLDIWGGEQYELSFKVWQCHG 452

  Fly   369 RVEISPCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAATVWMDDWQYFIMLYTSGLTLGAKDKVN 433
            |:..:|||.|.|::|.........||.:.::.|..|.|.|||||::..:..:..|  :|..|..:
 Worm   453 RMVDAPCSRVAHIYRCKYAPFKNAGMGDFVSRNYKRVAEVWMDDYKETLYKHRPG--VGNADAGD 515

  Fly   434 VTERVALRERLQCKPFSWYLENIW--PEHFFPAPDRFFGKIIWLDGETECAQAYSKHMKNLPGRA 496
            :.....:||:||||.|.|:::.|.  .:.::||                                
 Worm   516 LKLMKGIREKLQCKSFDWFMKEIAFDQDKYYPA-------------------------------- 548

  Fly   497 LSREWKRAFEEIDSKAEELMALIDLERDKCL-RPLKEDVPRSSLSAVTVGDCTSHAQSMDMFV-- 558
                       ::.||.....:.::..:.|: ...||...|..|...|..|.....: .|:.:  
 Worm   549 -----------VEPKASAEGEIRNVGTNFCIDTQFKEQNQRFGLRKCTSDDKDGGGE-QDLRLTR 601

  Fly   559 ---ITPKGQIMTNDNVCLTYRQQKLGVIKMLKNRNATTSNVMLAQCAS-DSSQLWTYDMDTQQIS 619
               |.|||:.:..|  |.|               :...:.|:|..|.| ..:||:.|.:..:||.
 Worm   602 WHDIRPKGRKICFD--CST---------------SVDKAPVILFDCHSMKGNQLFKYRVAQKQIY 649

  Fly   620 HRDTKLCLTLKAATNSRLQKVEKVVLSM-ECDFKDITQKWGF 660
            |..:..|||  |..|.      |..|.| :||.....|||.:
 Worm   650 HPISGQCLT--ADENG------KGFLHMKKCDSSSDLQKWAW 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 105/238 (44%)
pp-GalNAc-T 153..457 CDD:133004 125/306 (41%)
Ricin_B_lectin 516..658 CDD:279046 36/149 (24%)
RICIN 524..660 CDD:238092 38/143 (27%)
gly-10NP_001041036.2 pp-GalNAc-T 241..539 CDD:133004 125/306 (41%)
Ricin_B_lectin 555..681 CDD:279046 36/151 (24%)
RICIN 557..681 CDD:238092 36/149 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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