DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and gly-11

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001022948.1 Gene:gly-11 / 176647 WormBaseID:WBGene00001636 Length:605 Species:Caenorhabditis elegans


Alignment Length:650 Identity:198/650 - (30%)
Similarity:301/650 - (46%) Gaps:161/650 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KKLWLLYLFLLFFAFFMFAISINLY------VASIQGGDAEMRHPK------------------- 48
            |.:.|:.||.:....:::   :::|      |.:....|.:.:|.|                   
 Worm     8 KTVGLICLFSILLTIYLY---VSMYPEDNERVWNSGNADIQRKHEKLNNGGQGRHDFDDDEGAEK 69

  Fly    49 -------------PP-PKRRSLWPHKN----IVAHYIGKGDIFGNMTADDYNINLFQPINGEGAD 95
                         || ||..:.:|.::    |....:||                   |||:..|
 Worm    70 DEEDAVEKQNIAAPPLPKSFTTFPDRSKEIEIDTDLLGK-------------------INGKAED 115

  Fly    96 GRPVVVPPRDRFRMQRFFRLNSFNLLASDRIPLNRTLKDYRTPECRDKKYASGLPSTSVIIVFHN 160
            ...|           ..::...||.|.||||...|.:||.|...|....|:..||:.|:::.:.|
 Worm   116 DLQV-----------EGYKKYQFNGLLSDRIGSRRKIKDSRNARCSSLTYSDSLPAASIVVCYFN 169

  Fly   161 EAWSVLLRTITSVINRS-PRHLLKEIILVDDASDRS--------YLKRQLESYVKVLAVPTRIFR 216
            |:.|||:|.:.|:.:|: |.| |.||:||||:|:.|        |.::.:..:.||     :..:
 Worm   170 ESPSVLIRMVNSIFDRTKPEH-LHEILLVDDSSEWSNATDEAIKYREKHIIQWEKV-----KFLK 228

  Fly   217 MKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFS 281
            ..|..||:.|::.||..|.|:||.|||:|||.:..||.|||.:||::|:.|:||:||||......
 Worm   229 TDKNEGLIRAKIFGARRANGEVLVFLDSHCEVNEEWLPPLLDQIKQNRRRVVCPIIDIIDAITMK 293

  Fly   282 YTKTFENHWGAFNWQLSFRWFSSDRKRQTAGNSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSYD 346
            |.:: ....|..||.::|:|   |...::......:..:|:.:|.|||||||||::||:|:||||
 Worm   294 YVES-PVCTGGVNWAMTFKW---DYPHRSYFEDPMNYVNPLKSPTMAGGLFAIDKEYFFEIGSYD 354

  Fly   347 SNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAATVWMD 411
            ..|.|||.||||:|.|||.|||.:.|.|||.|||:||...||   |..::.:..|..|.|.||:|
 Worm   355 EGMDVWGAENVEISVRIWTCGGELLIMPCSRVGHIFRRQRPY---GIKTDSMGKNSVRLARVWLD 416

  Fly   412 DW-QYFIMLYTSGLTLGAKDKVNVTERVALRERLQCKPFSWYLENIWPEHFFPAPDR-------- 467
            :: :.|.....:..|.  .|..::|.|::||..||||||.||||||:||..   ||.        
 Worm   417 EYLENFFEARPNYRTF--TDYGDLTSRISLRRNLQCKPFKWYLENIYPELL---PDNTPNQLNNQ 476

  Fly   468 --FFGK--IIWLDGETECAQAYS----------------KHMKNLPGRALSREWKRAFEEIDSKA 512
              ..||  :|.:...|.|..|.:                .||:.:      ::||.      |..
 Worm   477 ILVAGKKYLIKMANGTHCLSAENSQGRIANGNRVEMRKCNHMERM------QQWKY------SST 529

  Fly   513 EELMALIDLERDKCLRPL-KEDVPRSSLSAVTVGDCTSHAQ-SMDMFVITPKGQIMTND-NVCLT 574
            .|            |||: ...:...||..::|..|  |.| :..|:.::..|::.:.. |.|.|
 Worm   530 NE------------LRPMGSSRMCLDSLRGISVILC--HNQGAHQMWQVSNAGKLYSRSVNKCAT 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 104/244 (43%)
pp-GalNAc-T 153..457 CDD:133004 130/313 (42%)
Ricin_B_lectin 516..658 CDD:279046 13/61 (21%)
RICIN 524..660 CDD:238092 13/53 (25%)
gly-11NP_001022948.1 pp-GalNAc-T 162..461 CDD:133004 130/313 (42%)
Glyco_tranf_2_3 162..392 CDD:290369 102/239 (43%)
RICIN 484..599 CDD:238092 23/122 (19%)
Ricin_B_lectin 486..602 CDD:279046 23/120 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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