DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and gly-8

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001366981.1 Gene:gly-8 / 176595 WormBaseID:WBGene00001633 Length:421 Species:Caenorhabditis elegans


Alignment Length:348 Identity:131/348 - (37%)
Similarity:209/348 - (60%) Gaps:15/348 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 SFNLLASDRIPLNRTLKDYRTPECRDKKYASGLPSTSVIIVFHNEAWSVLLRTITSVINRSPRHL 181
            :|:.|:|:::..||.:.......|.::||.:.. ||||:::.||||.|.:||.|..:|..:|:.|
 Worm    75 AFDALSSEKLGPNRNVGKQAHKLCEEEKYDASY-STSVVVIHHNEALSTILRMINGIIEFTPKSL 138

  Fly   182 LKEIILVDDASDRSY-LKRQLESYVKVLAVPTRIF--RMKKRSGLVPARLLGAENARGDVLTFLD 243
            ||||:|.:|||:..: |.:.||.:.|:..:..::.  |.:.|.||:.|::..:..|.|:|:.|:|
 Worm   139 LKEIVLYEDASEEDHVLTKHLEKFAKIKGLEDKLIIKRSEYRQGLIRAKVHASRLATGEVIVFMD 203

  Fly   244 AHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFSYTKTFENHWGAFNWQLSFRW-FSSDRK 307
            :|||.:..||||||..|||..|.::.||:|:|:..:|.|:.:.....| |:|..:|:| :.....
 Worm   204 SHCEVAERWLEPLLQPIKEDPKSIVLPVVDLINPVSFDYSPSMVAKSG-FDWGFTFKWIYLPWEY 267

  Fly   308 RQTAGNSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEI 372
            .:|..|:.|    |..:|.|.|||.|:.::||.|:|.||..|.:||.||:|:|.:.|.|||||.:
 Worm   268 FETPENNVK----PFNSPAMPGGLLAMRKEYFVELGEYDMGMEIWGSENIELSLKAWLCGGRVVV 328

  Fly   373 SPCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAATVWMDDWQ-YFIMLYTSGLTLGAKDKVNVTE 436
            :|||.||||||...|||...||...|. |..|.|..|:.::: .|..:...|..:...|   :||
 Worm   329 APCSRVGHVFRMRRPYTSKPGMDTALY-NAVRVAKTWLGEYESKFFAVKPRGAKMVFGD---LTE 389

  Fly   437 RVALRERLQCKPFSWYLENIWPE 459
            .:.:::||:||...|::||::||
 Worm   390 PMQVKDRLKCKDMKWFIENVYPE 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 99/239 (41%)
pp-GalNAc-T 153..457 CDD:133004 119/308 (39%)
Ricin_B_lectin 516..658 CDD:279046
RICIN 524..660 CDD:238092
gly-8NP_001366981.1 pp-GalNAc-T 110..410 CDD:133004 119/308 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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