DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and gly-9

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001022876.1 Gene:gly-9 / 176557 WormBaseID:WBGene00012934 Length:579 Species:Caenorhabditis elegans


Alignment Length:593 Identity:209/593 - (35%)
Similarity:301/593 - (50%) Gaps:100/593 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 NLFQPINGEGADGRPVVVPPRD----RFRMQRFFRLNSFNLLASDRIPLNRTLKDYRTPECRDKK 144
            |...|..|.|..|:|||:..:|    :..|:::|    .|:.|||:|.|:|.:.|.|...|:|.|
 Worm    67 NYTAPREGPGEKGKPVVLTGKDAELGQADMKKWF----MNVHASDKISLDRDVPDPRIQACKDIK 127

  Fly   145 Y-ASGLPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYVKVL 208
            | .:.||.|||||:|.:|||:.||||:.|||||||..||:|:||:||.|.|..|:..|:.::|..
 Worm   128 YDYAALPKTSVIIIFTDEAWTPLLRTVHSVINRSPPELLQEVILLDDNSKRQELQEPLDEHIKRF 192

  Fly   209 AVPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVICPVID 273
            ....|:.|...|.||:.|:|.||..|.||::.|||:|||.:.|||||::.||.:.|..::||:||
 Worm   193 GGKVRLIRKHVRHGLIRAKLAGAREAVGDIIVFLDSHCEANHGWLEPIVQRISDERTAIVCPMID 257

  Fly   274 IISDDNFSYTKTFENHWGAFNWQLSFRW---FSSDRKRQTAGNSSKDSTDPIATPGMAGGLFAID 335
            .|||:..:|...:....|.|:|.|.|.|   ...::||:|      ..||.|.:|.|||||.|.:
 Worm   258 SISDNTLAYHGDWSLSTGGFSWALHFTWEGLSEEEQKRRT------KPTDYIRSPTMAGGLLAAN 316

  Fly   336 RKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPYTFPG--GMSEVL 398
            |:||:|:|.||..|.:|||||:|:|||.|.|||.:|..|||||||:||:..||...|  ...:|.
 Worm   317 REYFFEVGGYDEEMDIWGGENLEISFRAWMCGGSIEFIPCSHVGHIFRAGHPYNMTGRNNNKDVH 381

  Fly   399 TDNLARAATVWMDDWQYFIMLYTSGLTLGAKDKVNVTERVALRERLQCKPFSWYLENIWPEHFFP 463
            ..|..|.|.|||||::....::...|.  .||..::|.|..||:||.||||.|:|:||..     
 Worm   382 GTNSKRLAEVWMDDYKRLYYMHREDLR--TKDVGDLTARHELRKRLNCKPFKWFLDNIAK----- 439

  Fly   464 APDRFFGKIIWLDGETECAQAYSKHMKNLPGRALSREWKRAFEEIDSKAEELMALIDLERDKCLR 528
                  ||.| :|   |...||......:.|..:                            |..
 Worm   440 ------GKFI-MD---EDVVAYGALHTVVSGTRM----------------------------CTD 466

  Fly   529 PLKEDVPRSSLSAVTVGDCTSHAQSMDMFVITPKGQIMTNDNVCLTYRQQKLGVIKMLKNRNATT 593
            .|:.|...|.|  :.|..|.....|..:..::.:|. :..:|.|                .:...
 Worm   467 TLQRDEKMSQL--LGVFHCQGKGSSPQLMSLSKEGN-LRRENTC----------------ASEEN 512

  Fly   594 SNVMLAQCASDS--SQLWTYDMDTQQISHRDTKLCLT---LKAATNSRLQKVEKVVLSMECDFKD 653
            .|:.:..|:..:  ::.|.|  :.:.|.:..:..|::   ||...|:         :.:|||.||
 Worm   513 GNIRMKTCSKKAQFNERWAY--ENKMIRNLKSGKCMSTANLKPGDNA---------IVVECDEKD 566

  Fly   654 ITQKWGFI 661
            ..|||.||
 Worm   567 EHQKWNFI 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 117/238 (49%)
pp-GalNAc-T 153..457 CDD:133004 143/308 (46%)
Ricin_B_lectin 516..658 CDD:279046 26/146 (18%)
RICIN 524..660 CDD:238092 28/140 (20%)
gly-9NP_001022876.1 pp-GalNAc-T 137..438 CDD:133004 143/308 (46%)
Ricin_B_lectin 450..571 CDD:279046 29/178 (16%)
RICIN 458..573 CDD:238092 29/172 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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