DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant3 and gly-3

DIOPT Version :10

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_498722.1 Gene:gly-3 / 176112 WormBaseID:WBGene00001628 Length:612 Species:Caenorhabditis elegans


Alignment Length:626 Identity:245/626 - (39%)
Similarity:338/626 - (53%) Gaps:107/626 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 HPKPPPKR-RSLWPHKNIVAHYIGK---GDIFGNMTADDYNINLFQPINGEGADGRPVVVPPRDR 106
            ||..|.|: :.::|.....|:.:.|   ...||            ...:|:|..|  |.||...:
 Worm    73 HPIQPEKQEKQVYPVDKETANQLRKLMETQAFG------------PGYHGQGGTG--VTVPEDKK 123

  Fly   107 FRMQRFFRLNSFNLLASDRIPLNRTLKDYRTPECR---DKKYASGLPSTSVIIVFHNEAWSVLLR 168
            ...::.|..|.||::||:.|.:||||.|||:..||   :....:|:|.||:|||||||||:.|||
 Worm   124 TIKEKRFLENQFNVVASEMISVNRTLPDYRSDACRTSGNNLKTAGMPKTSIIIVFHNEAWTTLLR 188

  Fly   169 TITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYVKVLAVPTRIFRMKKRSGLVPARLLGAEN 233
            |:.|||||||||||:|||||||.|||.||.:.|:||:|:..:|..:..::.||||:.|||.|:|.
 Worm   189 TLHSVINRSPRHLLEEIILVDDKSDRDYLVKPLDSYIKMFPIPIHLVHLENRSGLIRARLTGSEM 253

  Fly   234 ARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFSYTKTFENHWGAFNWQLS 298
            |:|.:|.|||||.|.:.||||||:||:.|.||.|:.|:||:||||.|.|....|..||.|||.|:
 Worm   254 AKGKILLFLDAHVEVTDGWLEPLVSRVAEDRKRVVAPIIDVISDDTFEYVTASETTWGGFNWHLN 318

  Fly   299 FRWFSSDRKRQTAGNSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRI 363
            |||::..::......|  |.:.||.||.:||||||||:::||::||||..|:||||||:|:|||:
 Worm   319 FRWYAVPKRELNRRGS--DRSMPIQTPTIAGGLFAIDKQFFYDIGSYDEGMQVWGGENLEISFRV 381

  Fly   364 WQCGGRVEISPCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAATVWMDDWQ-YFIMLYTSGLTLG 427
            |.|||.:||.|||.||||||..||||||||.::|:..|.||.|.||||::: :|..:..:...:.
 Worm   382 WMCGGSLEIHPCSRVGHVFRKQTPYTFPGGTAKVIHHNAARTAEVWMDEYKAFFYKMVPAARNVE 446

  Fly   428 AKDKVNVTERVALRERLQCKPFSWYLENIWPEHFFPAPDRFFGKIIWLDGETE-CAQAYSKHMKN 491
            |.|   |:||..|||.||||.|.||||||:||...||..|..|.|:  :..|| |.....|....
 Worm   447 AGD---VSERKKLRETLQCKSFKWYLENIYPEAPLPADFRSLGAIV--NRFTEKCVDTNGKKDGQ 506

  Fly   492 LPGRALSREWKRAFEEIDSKAEELMALIDLERDKCLRPLKEDVPRSSLSAVTVGDCTSHAQSMDM 556
            .||                                                 :..|.. |.....
 Worm   507 APG-------------------------------------------------IQACHG-AGGNQA 521

  Fly   557 FVITPKGQIMTNDNVCLTY-RQQKLGVIKMLKNRNATTSNVMLAQCASDS---SQLWTYDMDTQQ 617
            :.:|.||:| .:|::||:. ...::|            |.:.|.:|:...   ..::.:|.....
 Worm   522 WSLTGKGEI-RSDDLCLSSGHVYQIG------------SELKLERCSVSKINVKHVFVFDDQAGT 573

  Fly   618 ISHRDTKLCLTLKAATNSRLQKVEKVVLSMECDFKDITQKW 658
            :.|:.|..|:|         ...::|.|. ||......|.|
 Worm   574 LLHKKTGKCVT---------GADQRVTLD-ECGLGRKDQMW 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 pp-GalNAc-T 153..457 CDD:133004 173/304 (57%)
beta-trefoil_Ricin_Pgant3-like 515..661 CDD:467338 24/148 (16%)
gly-3NP_498722.1 pp-GalNAc-T 173..473 CDD:133004 173/304 (57%)
beta-trefoil_Ricin_GALNT1-like 481..608 CDD:467311 33/199 (17%)

Return to query results.
Submit another query.