DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and Galnt1

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001153876.1 Gene:Galnt1 / 14423 MGIID:894693 Length:559 Species:Mus musculus


Alignment Length:576 Identity:248/576 - (43%)
Similarity:339/576 - (58%) Gaps:104/576 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 QPINGEGADGRPVVVPPRDRFRMQRFFRLNSFNLLASDRIPLNRTLKDYRTPECRDKKYASGLPS 151
            :|..|.|..|:|||:|..|:.:|:..|::|.|||:||:.|.|||:|.|.|...|:.|.|...||:
Mouse    53 KPHEGPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPT 117

  Fly   152 TSVIIVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYVKVLAVPTRIFR 216
            |||:|||||||||.||||:.|||||||||:::||:||||||:|.:|||.||||||.|.||..:.|
Mouse   118 TSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIR 182

  Fly   217 MKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFS 281
            |::||||:.|||.||..:||.|:|||||||||:.|||||||:|||..|:.|:||:||:||||.|.
Mouse   183 MEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFE 247

  Fly   282 YTKTFENHWGAFNWQLSFRWF-----SSDRKRQTAGNSSKDSTDPIATPGMAGGLFAIDRKYFYE 341
            |....:..:|.|||:|:|||:     ..||::       .|.|.|:.||.||||||:|||.||.|
Mouse   248 YMAGSDMTYGGFNWKLNFRWYPVPQREMDRRK-------GDRTLPVRTPTMAGGLFSIDRDYFQE 305

  Fly   342 MGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAA 406
            :|:||:.|.:|||||:|:|||||||||.:||..|||||||||.:||||||||..:::..|..|.|
Mouse   306 IGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLA 370

  Fly   407 TVWMDDWQYFIMLYTSGLTLGAKDKVNVTERVALRERLQCKPFSWYLENIWPE-----HFFPAPD 466
            .||||:::.|..:.:.|:|  ..|..:::.|:.||.:|||||||||||||:|:     |:|    
Mouse   371 EVWMDEFKNFFYIISPGVT--KVDYGDISSRLGLRRKLQCKPFSWYLENIYPDSQIPRHYF---- 429

  Fly   467 RFFGKIIWLDGETECAQAYSKHMKNLPGRALSREWKRAFEEIDSKAEELMALIDLERDKCLRPLK 531
                                                           .|..:.::|.::||    
Mouse   430 -----------------------------------------------SLGEIRNVETNQCL---- 443

  Fly   532 EDVPRSSLSAVTVGDCTSHAQ-SMDMFVITPKGQIMTNDNVCLTYRQQKL-GVIKMLKNRNATTS 594
            :::.|.....|.:.:|  |.. ...:|..|...:|.| |::||..  .|| |.:.|||..:.   
Mouse   444 DNMARKENEKVGIFNC--HGMGGNQVFSYTANKEIRT-DDLCLDV--SKLNGPVTMLKCHHL--- 500

  Fly   595 NVMLAQCASDSSQLWTYDMDTQQISHRDTKLCL-----------TLKAATNSRLQK 639
                     ..:|||.||.....:.|.::..||           :::..|.||.|:
Mouse   501 ---------KGNQLWEYDPVKLTLQHVNSNQCLDKATEEDSQVPSIRDCTGSRSQQ 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 149/240 (62%)
pp-GalNAc-T 153..457 CDD:133004 181/308 (59%)
Ricin_B_lectin 516..658 CDD:279046 32/137 (23%)
RICIN 524..660 CDD:238092 31/129 (24%)
Galnt1NP_001153876.1 Catalytic subdomain A 115..225 78/109 (72%)
pp-GalNAc-T 119..419 CDD:133004 181/308 (59%)
Catalytic subdomain B 285..347 43/61 (70%)
Ricin_B_lectin 432..548 CDD:306998 32/137 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2642
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D194016at33208
OrthoFinder 1 1.000 - - FOG0002015
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.870

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