DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and Galnt2

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_644678.2 Gene:Galnt2 / 108148 MGIID:894694 Length:570 Species:Mus musculus


Alignment Length:643 Identity:228/643 - (35%)
Similarity:314/643 - (48%) Gaps:127/643 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LFLLFFAFFMFAISINLYVASIQGGDA---------------EMRHPK-----------PPPKRR 54
            |::|..|::|::...:...|.  ||.|               ::.|.:           ||.|.|
Mouse    14 LWVLGIAYYMYSGGGSALAAG--GGGAGRKGDWNDIDSIKKKDLHHSRGDEKAQGVETLPPGKVR 76

  Fly    55 SLWPHKNIVAHYIGKGDIFGNMTADDYNINLFQPINGEGADGRPVVVPPRDRFRMQRFFRLNSFN 119
              ||..|..| |:|     |.|..             .|.|       |..|         |.||
Mouse    77 --WPDFNQEA-YVG-----GTMVR-------------SGQD-------PYAR---------NKFN 104

  Fly   120 LLASDRIPLNRTLKDYRTPECRDKKYASGLPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLKE 184
            .:.||::.::|.:.|.|..:|:.|::...||:|||:|.|||||.|.||||:.||:.|||.||:||
Mouse   105 QVESDKLHMDRGIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKRSPPHLIKE 169

  Fly   185 IILVDDASDRSYLKRQLESYVKVLAVPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHCECS 249
            ||||||.|:.......|....||     |:.|..:|.||:.:|:.||:.|:..||||||:||||:
Mouse   170 IILVDDYSNDPEDGALLGKIEKV-----RVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECN 229

  Fly   250 RGWLEPLLSRIKESRKVVICPVIDIISDDNFSYTKTFENHWGAFNWQLSFRW--FSSDRKRQTAG 312
            ..||||||.|:.|.|..|:.|:||:|:.|||.|.....:..|.|:|.|.|:|  .:.:::|...|
Mouse   230 ERWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQG 294

  Fly   313 NSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSH 377
            |    ...||.||.:|||||.:|:.||.|:|.||..|.||||||:|:|||:|||||.:||.|||.
Mouse   295 N----PVAPIKTPMIAGGLFVMDKLYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSR 355

  Fly   378 VGHVFRSSTPYTFPGGMSEVLTDNLARAATVWMDDWQYFIMLYTSGLTLGAKDKVNVTERVALRE 442
            ||||||...|||||||...|...|..|||.||||::::|  .|.:..:.......|:..|:.||:
Mouse   356 VGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKHF--YYAAVPSARNVPYGNIQSRLELRK 418

  Fly   443 RLQCKPFSWYLENIWPEHFFP-APDRFFGKIIWLDGETECAQA-----------YSKHMKNLPGR 495
            :|.||||.|||:|::||...| ..|..||.   |...|.|...           |..|  |..| 
Mouse   419 KLGCKPFKWYLDNVYPELRVPDHQDIAFGA---LQQGTNCLDTLGHFADGVVGIYECH--NAGG- 477

  Fly   496 ALSREWKRAFEEIDSKAEELMALIDLERDKCLRPLKEDVPRSSLSAVTVGDCTSHAQSMDMFVIT 560
              ::||....|    |:.:.|       |.||..    |.||..|.:.:..|..:........|.
Mouse   478 --NQEWALTKE----KSVKHM-------DLCLTV----VDRSPGSLIRLQGCRENDSRQKWEQIE 525

  Fly   561 PKGQIM-TNDNVCLTYRQQKLGVIKMLKNRNATTSNVMLAQCASDSSQLWTYDMDTQQ 617
            ...::. ...|:|             |.:|.|.:..:.:..|....||.|.:.::.||
Mouse   526 GNSKLRHVGSNLC-------------LDSRTAKSGGLSVEVCGPALSQQWKFSLNLQQ 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 123/237 (52%)
pp-GalNAc-T 153..457 CDD:133004 152/305 (50%)
Ricin_B_lectin 516..658 CDD:279046 21/103 (20%)
RICIN 524..660 CDD:238092 20/95 (21%)
Galnt2NP_644678.2 Catalytic subdomain A 134..239 60/109 (55%)
pp-GalNAc-T 138..433 CDD:133004 152/305 (50%)
Catalytic subdomain B 299..361 41/61 (67%)
Ricin_B_lectin 445..562 CDD:279046 31/152 (20%)
RICIN 455..564 CDD:238092 28/141 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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