DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and POC1B-GALNT4

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001186710.1 Gene:POC1B-GALNT4 / 100528030 HGNCID:42957 Length:575 Species:Homo sapiens


Alignment Length:647 Identity:233/647 - (36%)
Similarity:308/647 - (47%) Gaps:139/647 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 VASIQGGDAEMRHP---KPPPKRRSL--WPHKNIVAHYIGKGDIFGNMTADDYNINLFQPINGEG 93
            ::.:|....::..|   |||...|:|  |          ||        |....:|         
Human    46 LSDLQKNTEDLSRPLYKKPPADSRALGEW----------GK--------ASKLQLN--------- 83

  Fly    94 ADGRPVVVPPRDRFRMQ-RFFRLNSFNLLASDRIPLNRTLKDYRTPECRDKKY-ASGLPSTSVII 156
                      .|..:.| ......:.|:..||||.|:|.::|.|..||:.:|: ...||:|||||
Human    84 ----------EDELKQQEELIERYAINIYLSDRISLHRHIEDKRMYECKSQKFNYRTLPTTSVII 138

  Fly   157 VFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYVKVLAVPTRIFRMKKRS 221
            .|:|||||.|||||.||:..||..||||||||||.|||.|||.|||:|:..|. ..|:.|..||.
Human   139 AFYNEAWSTLLRTIHSVLETSPAVLLKEIILVDDLSDRVYLKTQLETYISNLD-RVRLIRTNKRE 202

  Fly   222 GLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFS-YTKT 285
            |||.|||:||..|.||||||||.||||:.|||||||.||......|:|||||.|..:.|. |.:.
Human   203 GLVRARLIGATFATGDVLTFLDCHCECNSGWLEPLLERIGRDETAVVCPVIDTIDWNTFEFYMQI 267

  Fly   286 FENHWGAFNWQLSFRWFS---SDRKRQTAGNSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSYDS 347
            .|...|.|:|:|:|:|.|   .:|.|:.:      ..|||.:|.|||||||:.:|||..:|:||:
Human   268 GEPMIGGFDWRLTFQWHSVPKQERDRRIS------RIDPIRSPTMAGGLFAVSKKYFQYLGTYDT 326

  Fly   348 NMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAATVWMDD 412
            .|.||||||:|:|||:|||||::||.|||||||||....||..|.     ...|.||||.||||:
Human   327 GMEVWGGENLELSFRVWQCGGKLEIHPCSHVGHVFPKRAPYARPN-----FLQNTARAAEVWMDE 386

  Fly   413 W-QYFIMLYTSGLTLGAKDKVNVTERVALRERLQCKPFSWYLENIWPEHFFPAPDRFFGKIIWLD 476
            : ::|   |........:...:::||..|||||:||.|.|||:|::|....| .||         
Human   387 YKEHF---YNRNPPARKEAYGDISERKLLRERLRCKSFDWYLKNVFPNLHVP-EDR--------- 438

  Fly   477 GETECAQAYSKHMKNLPGRALSREWKRAFEEIDSKAEELMALIDLERDKCLRPLKEDVPRSSLSA 541
                            ||      |..|.......:|            |   |..:.|.::.:.
Human   439 ----------------PG------WHGAIRSRGISSE------------C---LDYNSPDNNPTG 466

  Fly   542 VTVGDCTSHAQSMDMFV-ITPKGQIMTND--NVCLTYRQQKLGVIKMLKNRNATTSNVMLAQCAS 603
            ..:.....|.|..:.|. .|...:|..|.  .:|....:||              :.|.:..|..
Human   467 ANLSLFGCHGQGGNQFFEYTSNKEIRFNSVTELCAEVPEQK--------------NYVGMQNCPK 517

  Fly   604 D-----SSQLWTYDMDTQQISHRDTKLCLTLKAATNSRLQKVEKVVLSMECDFKDITQKWGF 660
            |     ::.:|.:..| ..|.|..:.|||:.......|..     |....||..|..|.|.|
Human   518 DGFPVPANIIWHFKED-GTIFHPHSGLCLSAYRTPEGRPD-----VQMRTCDALDKNQIWSF 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 139/239 (58%)
pp-GalNAc-T 153..457 CDD:133004 165/308 (54%)
Ricin_B_lectin 516..658 CDD:279046 28/149 (19%)
RICIN 524..660 CDD:238092 29/143 (20%)
POC1B-GALNT4NP_001186710.1 WcaA 131..427 CDD:223539 167/310 (54%)
pp-GalNAc-T 135..429 CDD:133004 165/308 (54%)
RICIN 443..573 CDD:238092 31/164 (19%)
Ricin_B_lectin 443..571 CDD:279046 30/162 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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