DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and galnt12

DIOPT Version :9

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_002935181.2 Gene:galnt12 / 100485011 XenbaseID:XB-GENE-986239 Length:597 Species:Xenopus tropicalis


Alignment Length:648 Identity:227/648 - (35%)
Similarity:318/648 - (49%) Gaps:122/648 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LYLF-----LLFFAFFMFAISINLYVASIQGGDAEMRHPKPPPKRRSLWPHKNIVAHYIGKGDIF 73
            |||.     |:|..|.:..           ||:        |...::|......|.|...:....
 Frog    18 LYLTMGVVGLVFLGFLLMG-----------GGE--------PDSGKNLVDEVEAVEHLEPRDVDD 63

  Fly    74 GNMTADDYNINLFQPINGEGADGRPVVVPPRDRFRMQRF---FRLN----------------SFN 119
            ....|:||. .|.:|:..:         ||.|...:..|   .|||                ..|
 Frog    64 PGEDAEDYE-QLRKPVYEK---------PPLDPNVLGEFGRAVRLNLSGKEKELENESIHKHQIN 118

  Fly   120 LLASDRIPLNRTLKDYRTPECRDKKYA-SGLPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLK 183
            :..||:|.|:|.|::...|.|:..||. ..||.|||||.|:|||||.||||:.||:..||..||:
 Frog   119 IYLSDKISLHRRLEERWNPMCKTVKYKYRRLPKTSVIIAFYNEAWSTLLRTVHSVLETSPDLLLE 183

  Fly   184 EIILVDDASDRSYLKRQLESYV----KVLAVPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDA 244
            |||||||.|||.:||..||.|:    ||     |:.|..||.|||.||||||..|:.:||||||.
 Frog   184 EIILVDDYSDREHLKEPLEKYISSWRKV-----RLIRANKREGLVRARLLGASIAKAEVLTFLDC 243

  Fly   245 HCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFSYT-KTFENHWGAFNWQLSFRWFSSDRKR 308
            ||||..|||||||.||:|....|||||||:|..:.|.|. ...|...|.|:|::.|.|.:..   
 Frog   244 HCECHEGWLEPLLERIREKESAVICPVIDVIDWNTFEYLGNAGEPQIGGFDWRMVFTWHTVP--- 305

  Fly   309 QTAGNSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEIS 373
            :|.....:...|.|::|.||||||::.:|||..:||||:.|.||||||:|.|||||||||.:|:.
 Frog   306 ETEQKKRRSPIDVISSPTMAGGLFSVSKKYFEHLGSYDTGMEVWGGENLEFSFRIWQCGGSLEVH 370

  Fly   374 PCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAATVWMDDWQYFIMLYTSGLTLGAKDKV-NVTER 437
            |||||||||....||:....:|     |..|||.||:|:::   .:|........|:.. :|:||
 Frog   371 PCSHVGHVFPRQAPYSRSKALS-----NSVRAAEVWLDEYK---EIYYHRNPHARKEPYGDVSER 427

  Fly   438 VALRERLQCKPFSWYLENIWPEHFFP--APDRFFGKIIWLDGETECAQAYSKHMKNLPGRALSR- 499
            :.|:||||||.|.|:|:||:||...|  .|.| ||.:.....|..|......:..::.|:.:.. 
 Frog   428 LQLKERLQCKHFKWFLDNIYPELHVPEDKPGR-FGMLKNKGMENVCFDYNPPNENDVSGQQIILY 491

  Fly   500 -----------EWKRAFEEI--DSKAEELMALIDLERDKCLRPLKEDVPRSSLSAVTVGDCTSHA 551
                       |: .::.||  :::..|..|..|.:.|.                :|:..|..:.
 Frog   492 PCHGMGQNQFFEY-TSYNEIRYNTRQPEGCASADFDSDH----------------LTMFLCRENG 539

  Fly   552 QSMDMFVITPKGQ--IMTNDNVCLTYRQQK-LGVIKMLKNRNATTSNVMLAQCASDSSQLWTY 611
            |.:      |:.|  |..:|.:....:.:| :..::.:||.:   ...:|..|:...:|.|.:
 Frog   540 QEV------PENQKFIFRDDGILFHPKTKKCVQAVRNIKNED---PEPVLRPCSESDNQKWYF 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 133/240 (55%)
pp-GalNAc-T 153..457 CDD:133004 157/309 (51%)
Ricin_B_lectin 516..658 CDD:279046 17/99 (17%)
RICIN 524..660 CDD:238092 15/91 (16%)
galnt12XP_002935181.2 pp-GalNAc-T 153..447 CDD:133004 157/309 (51%)
RICIN 461..593 CDD:238092 25/157 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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