DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant3 and Galnt6

DIOPT Version :10

Sequence 1:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001165534.1 Gene:Galnt6 / 100361647 RGDID:2319726 Length:622 Species:Rattus norvegicus


Alignment Length:572 Identity:227/572 - (39%)
Similarity:304/572 - (53%) Gaps:105/572 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 QPINGEGADGRPVVVPPRDRFRMQRF-----------FRLNSFNLLASDRIPLNRTL-KDYRTPE 139
            |..|..||||:        .|:.:.:           ::.:.||..|||||.|.|:| .|.|.||
  Rat   108 QDPNSPGADGK--------AFQKKEWTLLETQEKDEGYKKHCFNAFASDRISLQRSLGPDTRPPE 164

  Fly   140 CRDKKY--ASGLPSTSVIIVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLE 202
            |.|:|:  ...||:|||:|||||||||.||||:.||::.||..||||||||||||...:||.:||
  Rat   165 CVDQKFRRCPPLPTTSVVIVFHNEAWSTLLRTVYSVLHTSPAILLKEIILVDDASTDEHLKEKLE 229

  Fly   203 SYVKVLAVPTRIFRMKKRSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVV 267
            .||:.|.: .|:.|.::|.||:.||||||..|:.:|||||||||||..|||||||:||.|.:..|
  Rat   230 RYVQQLQI-VRVVRQQERKGLITARLLGASVAQAEVLTFLDAHCECFHGWLEPLLARIAEDKTAV 293

  Fly   268 ICPVIDIISDDNFSYTKTFE----NHWGAFNWQLSFRW-FSSDRKRQTAGNSSKDSTDPIATPGM 327
            :.|.|..|..:.|.::|...    :..|.|:|.|:|.| ...:.::|    ..||.|.||.:|..
  Rat   294 VSPDIVTIDLNTFQFSKPMRRGKAHSRGNFDWSLTFGWEMLPEHEKQ----RRKDETYPIKSPTF 354

  Fly   328 AGGLFAIDRKYFYEMGSYDSNMRVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPYTFPG 392
            |||||:|.:.||..:|:||:.|.:|||||||||||:|||||::||.|||.||||||:.:|:|||.
  Rat   355 AGGLFSISKAYFEHIGTYDNQMEIWGGENVEMSFRVWQCGGQLEIIPCSVVGHVFRTKSPHTFPK 419

  Fly   393 GMSEVLTDNLARAATVWMDDWQYFIMLYTSGLTLGAKDKVN----VTERVALRERLQCKPFSWYL 453
            |.| |:..|..|.|.|||||  |..:.|...|......|.|    |:||:.|||:|.|..|||||
  Rat   420 GTS-VIARNQVRLAEVWMDD--YKKIFYRRNLQAAKMAKENNFGDVSERLRLREQLHCHNFSWYL 481

  Fly   454 ENIWPEHFFPAPDRFFGKIIWLDGETECAQA------------YSKHMKNLPGRALSREWKRAFE 506
            .|::||.|.|..:..|...|...|.::|...            |..|  ||.|       .:.||
  Rat   482 HNVYPEMFVPDLNPTFSGAIKNLGTSQCLDVGENNRGGKPLIMYVCH--NLGG-------NQYFE 537

  Fly   507 EIDSKAEELMALIDLE----RDKCLRPLKEDVPRSSLSAVTVGDC-----TSHAQSMDMFVITPK 562
            ....:        ||.    :..||        .:|.|.:.:.:|     .|.....:.:.:| :
  Rat   538 YTSQR--------DLRHNIGKQLCL--------HASGSTLGLRNCQFIGKNSEVPKDEEWELT-Q 585

  Fly   563 GQIMTN--DNVCLTYRQQKLGVIKMLKNRNATTSNVMLAQC-ASDSSQLWTY 611
            .|::.|  ...|||.:.:|                ..:|.| .||..|||.:
  Rat   586 DQLIRNLGSGTCLTSKDKK----------------PAMAPCNPSDPYQLWLF 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant3NP_610256.1 pp-GalNAc-T 153..457 CDD:133004 163/312 (52%)
beta-trefoil_Ricin_Pgant3-like 515..661 CDD:467338 22/109 (20%)
Galnt6NP_001165534.1 pp-GalNAc-T 180..485 CDD:133004 163/312 (52%)
beta-trefoil_Ricin-like 495..622 CDD:483949 33/169 (20%)

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