DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ep and Tspan15

DIOPT Version :10

Sequence 1:NP_523642.1 Gene:Tsp42Ep / 35626 FlyBaseID:FBgn0033137 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_932113.2 Gene:Tspan15 / 70423 MGIID:1917673 Length:294 Species:Mus musculus


Alignment Length:270 Identity:59/270 - (21%)
Similarity:108/270 - (40%) Gaps:58/270 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YNTIKYTGLLSNLLYMLLGIGVMSGAGL--GLQMAEPNTPEHTYFVKS--LVLGGSICMIVMFGC 65
            |..:|::.::.:.::.|:| |::...|:  ..:..:..|.|..:...:  |:|.|.:..||.|  
Mouse    17 YLWLKFSLIIYSTVFWLIG-GLVLSVGIYAEAERQKYKTLESAFLAPAIILILLGVVMFIVSF-- 78

  Fly    66 YGMVANL---LCVNLIFTMFILIALAAEYL----------QLHHYHSPSLRSPGGAWQQLELAWH 117
            .|::|:|   ||:...|...:.|.|..|.:          |...:.:.::|      :.:|..:.
Mouse    79 IGVLASLRDNLCLLQSFMYILGICLVMELIGGIVALIFRNQTIDFLNDNIR------RGIENYYD 137

  Fly   118 GLDRDPELMHQYEASQHCCGYNGADDYK-----RLH---LLVPASC---YQAAVNDTAQQI---- 167
            .|| ...:|...:....||   |.:||:     :.|   ...|.:|   |...:.:|...:    
Mouse   138 DLD-FKNIMDFVQKKFKCC---GGEDYRDWSKNQYHDCSAPGPLACGVPYTCCIRNTTDVVNTMC 198

  Fly   168 -YPSGCLETLNRSQRYIQHR---DKLYMW------AIVGLEIFILLQTV--ALSVLLFRLRQRQR 220
             |.:...|.|| :|..|..|   :.:.:|      .:.||.:.|||...  .|..||:..|....
Mouse   199 GYKTIDKERLN-AQNIIHVRGCTNAVLIWFMDNYTIMAGLLLGILLPQFLGVLLTLLYITRVEDI 262

  Fly   221 IARRQVPPGV 230
            |....|..|:
Mouse   263 ILEHSVTDGL 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EpNP_523642.1 Tetraspanin 23..213 CDD:459767 51/233 (22%)
tetraspanin_LEL 91..183 CDD:239401 21/117 (18%)
Tspan15NP_932113.2 Tetraspanin 20..>157 CDD:459767 30/149 (20%)
penumbra_like_LEL 114..231 CDD:239411 24/127 (19%)

Return to query results.
Submit another query.