DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ep and tspan14

DIOPT Version :10

Sequence 1:NP_523642.1 Gene:Tsp42Ep / 35626 FlyBaseID:FBgn0033137 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001007871.1 Gene:tspan14 / 493257 XenbaseID:XB-GENE-868280 Length:270 Species:Xenopus tropicalis


Alignment Length:259 Identity:57/259 - (22%)
Similarity:92/259 - (35%) Gaps:86/259 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CYNTIKYTGLLSNLLY-----MLLGIGVMSGAGLG-LQMAEPNTPEHTYFVKSLVLGGSICMIVM 62
            ||   ||.....|:::     :|||:|:.:.:..| |......|..|.:....|||   :..::|
 Frog    14 CY---KYLLFSYNIIFWLSGMVLLGVGLWAWSEKGILSDITKVTRLHGFDPVWLVL---VVGVIM 72

  Fly    63 F-----GCYGMVANLLC--------VNLIFTMFILIALAAEYLQ------LHHYHSPSLRSPGGA 108
            |     ||.|.:...:|        :.|||.|.:.:|:.|...|      ...:...:::|    
 Frog    73 FTLGFAGCVGALRENICLLKFFCGAIVLIFFMELAVAVLAFLFQDWVKDRAKDFFENNIKS---- 133

  Fly   109 WQQLELAWHGLDRD-PELMHQYEASQHCCGYNGADDY-------------KRLHLLVPASCYQAA 159
                    :..|.| ..|:...:.:..|||....||:             .|....||.||   .
 Frog   134 --------YRDDIDLQNLIDSLQKANQCCGAVSPDDWDLNEYFNCSVENPSRERCGVPFSC---C 187

  Fly   160 VNDTAQQI---------------------YPSGCLETLNRSQRYIQHRDKLYMWAIVGLEIFIL 202
            |.|.||.:                     :..||:..|   :.::..  .:|:.|.|.|.|.||
 Frog   188 VPDPAQTVVNTQCGYDARRKKPNERPNTTFSKGCISAL---EAWLPR--NIYIVAGVFLVISIL 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EpNP_523642.1 Tetraspanin 23..213 CDD:459767 50/235 (21%)
tetraspanin_LEL 91..183 CDD:239401 22/132 (17%)
tspan14NP_001007871.1 Tetraspanin 16..257 CDD:459767 55/254 (22%)
TM4SF9_like_LEL 113..233 CDD:239412 22/139 (16%)

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