DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ep and Tspan31

DIOPT Version :10

Sequence 1:NP_523642.1 Gene:Tsp42Ep / 35626 FlyBaseID:FBgn0033137 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001008379.1 Gene:Tspan31 / 362890 RGDID:1309876 Length:210 Species:Rattus norvegicus


Alignment Length:242 Identity:60/242 - (24%)
Similarity:94/242 - (38%) Gaps:73/242 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NLLYMLLG---IGVMS-GAGLGLQMAEPNTPEHTYFVKSL-VLGGSIC------MIVMFGCYGMV 69
            |::|||:|   |||.: |.|||:             |.|: ::||.|.      :|.:.|..|.|
  Rat    17 NVVYMLVGLLLIGVAAWGKGLGV-------------VSSIHIIGGVIAVGVFLLLIAVAGLVGAV 68

  Fly    70 ANLLCVNLIFTMFIL-------IALAAEYLQLHHYHSPSLRSPGGAWQQLELAWHGLDRDPELMH 127
             |...|.|.|.|.||       ..::...|.::......:         :..:|..|.....  |
  Rat    69 -NHHQVLLFFYMIILGLVFIFQFGISCSCLAINRNTQADV---------INASWWVLSNSTR--H 121

  Fly   128 QYEASQHCCG-YNGADDYKRLHLLVPASCYQAAVNDTAQQIYP-SGCLETLNRSQRYIQHRDKLY 190
            :.|.|..||| :|    ...:||...|||  :|:..|...  | ..|.||      :::|.||. 
  Rat   122 ELERSFDCCGLFN----LTTVHLHDDASC--SALCKTRSS--PCQMCGET------FLKHSDKA- 171

  Fly   191 MWAIVGLEIFILLQTVALSVLLFRLRQRQRIARRQVPPGVRREPRSN 237
            :..:.|:.:|.....:....|..|.|.             :::||:|
  Rat   172 LKILGGVGLFFSFTEILGVWLAMRFRN-------------QKDPRAN 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EpNP_523642.1 Tetraspanin 23..213 CDD:459767 51/209 (24%)
tetraspanin_LEL 91..183 CDD:239401 21/93 (23%)
Tspan31NP_001008379.1 Tetraspanin 9..196 CDD:459767 55/218 (25%)

Return to query results.
Submit another query.