DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ep and Cd82

DIOPT Version :10

Sequence 1:NP_523642.1 Gene:Tsp42Ep / 35626 FlyBaseID:FBgn0033137 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_031682.1 Gene:Cd82 / 12521 MGIID:104651 Length:266 Species:Mus musculus


Alignment Length:271 Identity:63/271 - (23%)
Similarity:108/271 - (39%) Gaps:80/271 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GCYNTIKYTGLLSNLLYMLLGIGVMSGAGLGLQMAEPNTPEHTYFV-------KSLVLG------ 54
            ||....||...|.|||:.:|| .|:.|.|:.: :|:.|:     |:       .||.:|      
Mouse     4 GCVKVTKYFLFLFNLLFFILG-AVILGFGVWI-LADKNS-----FISVLQTSSSSLQVGAYVFIG 61

  Fly    55 -GSICMIVMF-GCYGMVANLLCVNLIFTMFILIALAAEYL--QLHHYHSPSLRSPGG-------- 107
             |:|.:::.| ||.|.|..:.|:..::.:|:|:.|.|:..  .|.::::..|:...|        
Mouse    62 VGAITIVMGFLGCIGAVNEVRCLLGLYFVFLLLILIAQVTVGVLFYFNADKLKKEMGNTVMDIIR 126

  Fly   108 -----AWQQLELAWHGLDRDPELMHQYEASQHCCG----YNGADDYKRL---HLLVPASC----- 155
                 |....|.||          ...:|...|||    ||..::.:.:   ....|.||     
Mouse   127 NYTANATSSREEAW----------DYVQAQVKCCGWVSHYNWTENEELMGFTKTTYPCSCEKIKE 181

  Fly   156 ----------YQAAVNDTAQQIYP-------SGCLETLNRSQRYIQHRDKLYMWAIVGLEIFILL 203
                      :..|.|.|..:..|       .||:|   ::|.::|....:.:....|:.:..||
Mouse   182 EDNQLIVKKGFCEADNSTVSENNPEDWPVNTEGCME---KAQAWLQENFGILLGVCAGVAVIELL 243

  Fly   204 QTVALSVLLFR 214
             .:.||:.|.|
Mouse   244 -GLFLSICLCR 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EpNP_523642.1 Tetraspanin 23..213 CDD:459767 52/248 (21%)
tetraspanin_LEL 91..183 CDD:239401 24/135 (18%)
Cd82NP_031682.1 Tetraspanin 24..253 CDD:459767 53/249 (21%)
CD37_CD82_like_LEL 106..228 CDD:239413 24/134 (18%)

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