DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ep and Cd37

DIOPT Version :10

Sequence 1:NP_523642.1 Gene:Tsp42Ep / 35626 FlyBaseID:FBgn0033137 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_006540655.1 Gene:Cd37 / 12493 MGIID:88330 Length:396 Species:Mus musculus


Alignment Length:305 Identity:64/305 - (20%)
Similarity:110/305 - (36%) Gaps:113/305 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CYNTIKYTGLLSNLLYMLLGIGVMSGAG-------------LGLQMAEPNTPEHTYFVKSLVLGG 55
            |.:.|||...:.||.:.:|| |::...|             :||......|     :.|.|.:.|
Mouse    29 CLSLIKYFLFVFNLFFFVLG-GLIFCFGTWILIDKTSFVSFVGLSFVPLQT-----WSKVLAVSG 87

  Fly    56 SICM-IVMFGCYGMVANLLC-VNLIFTMFIL---------IALAAEYLQLH-------------H 96
            .:.| :.:.||.|.:..|.| :.|.|.|.:|         |.::.:.::|.             :
Mouse    88 VLTMALALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRVRLERRVQELVLRTIQSY 152

  Fly    97 YHSPSLRSPGGAWQ--QLELAWHGLDRDPELMHQYEASQHCCGYNGADDYKRLHLL--------- 150
            ..:|...:...:|.  |.:|                   .|||:....|:.:..:|         
Mouse   153 RTNPDETAAEESWDYAQFQL-------------------RCCGWQSPRDWNKAQMLKANESEEPF 198

  Fly   151 VPASCYQA-AVNDTA-------------------------------QQIYPSGCLETLNRSQRYI 183
            ||.|||.: |.||:.                               ..||..||.::|   |:::
Mouse   199 VPCSCYNSTATNDSTVFDKLFFSQLSRLGPRAKLRQTADICALPAKAHIYREGCAQSL---QKWL 260

  Fly   184 QHRDKLYMWAIVGLEIFILLQTVALSVLLFRLRQRQRIARRQVPP 228
            .:.    :.:|||:.:.:.|..|:...|..:| ||:.:||..|.|
Mouse   261 HNN----IISIVGICLGVGLLEVSGMALCLQL-QRRALAREHVLP 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EpNP_523642.1 Tetraspanin 23..213 CDD:459767 50/269 (19%)
tetraspanin_LEL 91..183 CDD:239401 24/147 (16%)
Cd37XP_006540655.1 Tetraspanin 48..>176 CDD:459767 26/152 (17%)
CD37_CD82_like_LEL 130..265 CDD:239413 24/160 (15%)

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