DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ep and si:ch73-139j3.4

DIOPT Version :10

Sequence 1:NP_523642.1 Gene:Tsp42Ep / 35626 FlyBaseID:FBgn0033137 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_068074269.1 Gene:si:ch73-139j3.4 / 101884436 ZFINID:ZDB-GENE-140106-202 Length:355 Species:Danio rerio


Alignment Length:288 Identity:49/288 - (17%)
Similarity:104/288 - (36%) Gaps:87/288 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IKYTGLLSNLLYMLLGIGVMS----------------GAGLGLQMAEPNTPEHTYFVKSLVLGGS 56
            :|:..:|.|..:::|||.:.:                .:|..:::....    .:|:..:|:|  
Zfish    10 LKFFFMLVNAFFVILGISIFACSAWILFDKDSFVSVLSSGQEVKVVAGG----LFFIGLVVVG-- 68

  Fly    57 ICMIVMFGCYGMVANLLCVNLIFTMFILIALAAEYL--------------QLHHYHSPSLRSPGG 107
               :.:.||.|......|..:.:..|:::.:..:..              .|.......::..||
Zfish    69 ---VSLLGCAGAYFESRCFIIFYLSFLIVIILGQIFITFVLLIRRKTIEQFLRDKVDEIIKQYGG 130

  Fly   108 AWQQLELAWHGLDRDPELMHQYEASQHCCGYNGADDYKRLHLLV--------PASCYQAA----V 160
              .:::.:|       :|:...:.|..|||...:::::...::.        |.||:...    :
Zfish   131 --DEIQTSW-------KLLDSVQTSARCCGRLNSNEWRNNTVIASLGGTDIYPCSCFNGTCPVIL 186

  Fly   161 NDT-----AQQIYPSGCLETLNRSQRYIQHRDKLYMWAIVGLEIFILLQTVALSVLLFRLRQRQR 220
            .:|     ...::..||.||             |..|    ||:.|:: ...:.|.|..::..|.
Zfish   187 EETYSFGNGSDVFERGCEET-------------LVNW----LEMNIIV-IFGMDVALILIQIMQF 233

  Fly   221 IARRQVPPGVRREPRSNHVSASRAHLLN 248
            |...|....:.|:.|..|.|    :|||
Zfish   234 IFAVQTFKCIGRKTRELHPS----NLLN 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EpNP_523642.1 Tetraspanin 23..213 CDD:459767 34/236 (14%)
tetraspanin_LEL 91..183 CDD:239401 17/122 (14%)
si:ch73-139j3.4XP_068074269.1 Tetraspanin 10..237 CDD:459767 41/262 (16%)
tetraspanin_LEL 117..215 CDD:351888 21/123 (17%)

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