DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ep and tspan15

DIOPT Version :10

Sequence 1:NP_523642.1 Gene:Tsp42Ep / 35626 FlyBaseID:FBgn0033137 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001017773.1 Gene:tspan15 / 100000710 ZFINID:ZDB-GENE-050417-295 Length:296 Species:Danio rerio


Alignment Length:243 Identity:48/243 - (19%)
Similarity:90/243 - (37%) Gaps:60/243 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YNTIKYTGLLSNLLYMLLGIGVMSGAGLGLQMAEP--NTPEHTYFVKSLVL--GGSICMIVMFGC 65
            |..:|::.:....::.|:| |.:...|:..::...  .|.|..:...:::|  .|.|..||.|  
Zfish    13 YFFLKFSLIGYATIFWLIG-GFILAIGIYAEVERQRYKTLEGVFLAPAIILIVLGIIMFIVSF-- 74

  Fly    66 YGMVANL---LCVNLIFTMFILIALAAEYLQLHHYHSPSLRSPGGAW------QQLELAWHGL-- 119
            .|::|:|   ||:..:|...:.:.|..|.:             ||..      |.:::....:  
Zfish    75 IGVLASLRDNLCLLKVFLYMLALCLVLELV-------------GGIVALIFKNQTVDILNKNIRK 126

  Fly   120 -------DRD-PELMHQYEASQHCCGYNGADD-----YKRLHLLVPASC---YQAAVNDTAQQIY 168
                   |.| ..:|...:.:..|||.....|     |.......|.:|   |...:....:.:.
Zfish   127 GMVNYYDDLDFKNIMDFVQKTFKCCGGTEYQDWEVNMYHNCSAPGPLACAAPYTCCIVTPGEVVN 191

  Fly   169 PSGCLETLNRSQR------YIQH-RDKLYMWAI------VGLEIFILL 203
            .....:|||:.:.      ||:. .|.:::|.|      .||.:.|.|
Zfish   192 TMCGYKTLNKDRHENTDVIYIRGCTDAVFIWLIDNYKTMAGLLLGIFL 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EpNP_523642.1 Tetraspanin 23..213 CDD:459767 45/225 (20%)
tetraspanin_LEL 91..183 CDD:239401 17/121 (14%)
tspan15NP_001017773.1 Tetraspanin 16..>153 CDD:459767 29/152 (19%)
penumbra_like_LEL 110..227 CDD:239411 20/116 (17%)

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