DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eo and Tspan13

DIOPT Version :9

Sequence 1:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_079635.1 Gene:Tspan13 / 66109 MGIID:1913359 Length:204 Species:Mus musculus


Alignment Length:138 Identity:34/138 - (24%)
Similarity:51/138 - (36%) Gaps:43/138 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IVGVLAALAGVYELDKFNEGSAEHTEKFVQLGMAGALILAGLVGCLGAI-FGSIKVMVVNLILLL 84
            :|||:.|: |::                        |.|..|||.:||: ...:.:....:||||
Mouse    45 VVGVVIAV-GIF------------------------LFLIALVGLIGAVKHHQVLLFFYMIILLL 84

  Fly    85 ALIASHIWKVS----HYNETKQLDATEVYVMDLWMKELVHHGAMQDLQQEYECCGDKGFSDYTSL 145
            ..|..  :.||    ..|..:|....||.    |....   .|..|:|:...|||.:.::.    
Mouse    85 VFIVQ--FSVSCACLALNREQQGQLLEVG----WNNTA---SARNDIQRNLNCCGFRSYNP---- 136

  Fly   146 NMKVPRSC 153
            |...|.||
Mouse   137 NDTCPASC 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 34/138 (25%)
tetraspanin_LEL 110..178 CDD:239401 11/44 (25%)
Tspan13NP_079635.1 Tetraspannin <55..187 CDD:306775 29/127 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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