DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eo and tspan33a

DIOPT Version :9

Sequence 1:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001002617.2 Gene:tspan33a / 436890 ZFINID:ZDB-GENE-040718-361 Length:281 Species:Danio rerio


Alignment Length:282 Identity:62/282 - (21%)
Similarity:111/282 - (39%) Gaps:93/282 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PTVRVCLQWTSVVFSTLTLI---VGVLAALAGVYELDKFNEGSAEHTEKFVQLGMAGALIL--AG 61
            |.|:..|.:.:::|..::|:   :||.:.:             .:|......|.:..||||  .|
Zfish    19 PVVKYLLFFFNMIFWIISLVLISIGVYSRI-------------VKHETALACLTVDPALILMVVG 70

  Fly    62 LV-------GCLGAIFGSIKVM-----VVNLILLLALIASHIWKV----SHYNETKQLD-ATEVY 109
            ::       ||:|::..:|.::     .:.::.||.|:|..:..|    :....|...| |.:.|
Zfish    71 ILMFFITFCGCVGSLRENICLLQTFCIFLTIMFLLQLLAGVLGFVFSDKARGKVTDMFDNAIKHY 135

  Fly   110 VMDLWMKELVHHGAMQDLQQEYECCGDKGFSDYTSLNM--------------KVPRS-CFHTKD- 158
            ..||.::.|:.:|     |:::.|||...|.|: |.||              .||.| |.|.|: 
Zfish   136 RDDLDLQNLIDYG-----QKQFNCCGGISFMDW-SKNMYFNCSDDNPSRERCSVPFSCCLHAKEE 194

  Fly   159 ---------GIHAL-------YPYGEGCMAAVKRAYLQIYRYEKWVH----------CGLIGYEV 197
                     |:.||       :....||:..:          ..|:|          .||...::
Zfish   195 TIINTMCGHGMQALNYLAASAFINTNGCIDIL----------VNWIHSNLFLLGGIALGLTIPQL 249

  Fly   198 VGIILGITLCCQLTNKTRRYTY 219
            |||:|...|..|:.::.:...|
Zfish   250 VGILLSQVLINQIQDQIKLQNY 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 58/266 (22%)
tetraspanin_LEL 110..178 CDD:239401 24/99 (24%)
tspan33aNP_001002617.2 Tetraspannin 21..262 CDD:278750 59/269 (22%)
penumbra_like_LEL 114..234 CDD:239411 31/135 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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