DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Eo and Tsp96F

DIOPT Version :9

Sequence 1:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001262976.1 Gene:Tsp96F / 43127 FlyBaseID:FBgn0027865 Length:284 Species:Drosophila melanogaster


Alignment Length:273 Identity:57/273 - (20%)
Similarity:104/273 - (38%) Gaps:83/273 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CLQWTSVVFSTLTLIVGVLAALAGVYEL----------DKFNEGSAEHTEKFVQLGMAGALILAG 61
            |:::..|:.:.|..::|:...:..|:.|          ..:|.   .|...:|.|.:...:.|..
  Fly     9 CVKYLMVLINILFWLIGLTIVVTSVWMLTDPTFMLSMTQNYNH---YHIALYVFLAIGILITLGA 70

  Fly    62 LVGCLGAIFGS----IKVMVVNLILLLALIASHIWKVSHYNETKQLDATEVYVMDLWMKELVHHG 122
            ..||.|....|    :....|.||:::|.||:..|  :.:|:.|..|.....|.....:|   :|
  Fly    71 FFGCCGVCRESQCLLVSFFCVILIVMVAQIAAGAW--AFHNKDKLDDIVRAAVKSSVQEE---YG 130

  Fly   123 ---------AMQDLQQEYECCGDKGFSDY------------------TSLNM--KVPRSCFHTKD 158
                     ....||:..:|||..|..|:                  :|:|:  .:|.||  .||
  Fly   131 QSTMSSRTVTFDTLQKNLKCCGADGPGDWATSRFNNVDRTNIVEIAVSSMNVFYNIPESC--CKD 193

  Fly   159 GI------------------HALYPYGEGCMAAVKRAYLQIYRYEKW-----VHCGLIGYEVVGI 200
            .:                  :|:|.  :||:..:    ::|. ||.|     |...:|..|::.:
  Fly   194 NLKDNECELSRRLKFGGPLNNAIYQ--QGCVDKL----IEII-YENWVTIFAVTAAVILLELLSL 251

  Fly   201 ILGITLCCQLTNK 213
            ...::|||.:.|:
  Fly   252 TFALSLCCAVRNQ 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 56/268 (21%)
tetraspanin_LEL 110..178 CDD:239401 21/114 (18%)
Tsp96FNP_001262976.1 Tetraspannin 9..261 CDD:278750 56/268 (21%)
CD151_like_LEL 107..233 CDD:239408 27/137 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.