DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eo and TM4SF

DIOPT Version :10

Sequence 1:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001261159.1 Gene:TM4SF / 37786 FlyBaseID:FBgn0020372 Length:292 Species:Drosophila melanogaster


Alignment Length:185 Identity:49/185 - (26%)
Similarity:69/185 - (37%) Gaps:48/185 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 AEHTEKFVQLGMAGALILAGLVGCLGAIF---GSIKVMVVNLILLLALIA--SHIWKVSHYNETK 101
            |.:..|...|||..||    ||.|:...|   |....|..||...:.:..  |.:..:..::.||
  Fly    74 ATNQRKRCLLGMFAAL----LVACICVQFIICGWSLAMRENLPTSVEIFIDDSFVEFLDKFSRTK 134

  Fly   102 QLDATEVYVMDLWMKELVHHGAMQDLQQEYECCGDKGFSDYTSLNMKVPRSCFHTKDGIHALYP- 165
                  |..:.||.:          :|.:.:|||..|..||..|::  |.||....:  ||... 
  Fly   135 ------VDNLHLWNR----------MQSQLQCCGVDGPLDYRRLSL--PWSCCSRPE--HAYESA 179

  Fly   166 ----YGEGCMAAVK---RAYLQIYRYEKWVHCGLIGYEVVGII--LGITLCCQLT 211
                |..||:|.|.   |..|.|..:         |..::.|.  |||.....||
  Fly   180 CDTHYKRGCLAVVSEQIRNRLLITAF---------GAAIIAIFQSLGIFCAVHLT 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EoNP_523641.2 Tetraspanin 8..208 CDD:459767 47/180 (26%)
tetraspanin_LEL 110..178 CDD:239401 21/75 (28%)
TM4SFNP_001261159.1 Tetraspanin 10..224 CDD:459767 47/182 (26%)

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