DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eo and Tsp42Er

DIOPT Version :9

Sequence 1:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster


Alignment Length:226 Identity:56/226 - (24%)
Similarity:103/226 - (45%) Gaps:36/226 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LQWTSVVFSTLTLIVGVLAALAGVYELDKFNEGSAEHTEKFVQLGMA-GALI-LAGLVGCLGAIF 70
            :::.:.:|:.|..::|:...:..|..:|:.    |...:..:.|.:| |::: |....||.|||.
  Fly     8 IRYLAFLFNFLCAVLGIATIVVNVIAIDQI----APKDQLILGLYIAVGSIVFLLSFFGCFGAIK 68

  Fly    71 GSIKV-------MVVNLILLLALIASHIWKVSHYNE-----TKQLDATEVYVMDLWMKELVHHGA 123
            .||.|       |:|  :|:::::...:::: |:.|     .||..|.:....|          |
  Fly    69 ESICVTWAYATSMLV--MLIVSIVMLFVFRM-HFEEDSITKLKQAFAKQTNTFD----------A 120

  Fly   124 MQDLQQEYECCGDKGFSDYTSLNMKVPRSCFHTKDGIHALYPYGEGCMAAVKRAYLQIYRYEKWV 188
            |.:.|.:|:|||.....||....:.||.||:...|     .||.:||:|.::..|.::.:..|.|
  Fly   121 MAEYQTQYQCCGIYKLKDYGDAYITVPSSCYDQND-----TPYRDGCLAKMETQYEELLKGPKIV 180

  Fly   189 HCGLIGYEVVGIILGITLCCQLTNKTRRYTY 219
            ...|:..|:........:...|.|:.||..|
  Fly   181 GWMLMVIEIGAFTFSTIMGVSLRNELRRSAY 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 51/215 (24%)
tetraspanin_LEL 110..178 CDD:239401 20/67 (30%)
Tsp42ErNP_523644.1 Tetraspannin 8..195 CDD:278750 51/208 (25%)
tetraspanin_LEL 93..174 CDD:239401 26/96 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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