DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eo and Tsp42Ep

DIOPT Version :9

Sequence 1:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001260759.1 Gene:Tsp42Ep / 35626 FlyBaseID:FBgn0033137 Length:250 Species:Drosophila melanogaster


Alignment Length:222 Identity:55/222 - (24%)
Similarity:99/222 - (44%) Gaps:24/222 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LQWTSVVFSTLTLIVGVLAALAGVYELDKFNEGSAEHTEKFVQLGMAGALILAGLVGCLGAIFGS 72
            :::|.::.:.|.:::|:.........|......:.|||.....|.:.|::.:..:.||.|.:   
  Fly     8 IKYTGLLSNLLYMLLGIGVMSGAGLGLQMAEPNTPEHTYFVKSLVLGGSICMIVMFGCYGMV--- 69

  Fly    73 IKVMVVNLI----LLLALIASHIWKVSHYNETKQLDATEVYVMDLWMK-ELVHHGAMQD--LQQE 130
            ..::.||||    :|:||.|.:: ::.||:........     ..|.: ||..||..:|  |..:
  Fly    70 ANLLCVNLIFTMFILIALAAEYL-QLHHYHSPSLRSPG-----GAWQQLELAWHGLDRDPELMHQ 128

  Fly   131 YE----CCGDKGFSDYTSLNMKVPRSCFH--TKDGIHALYPYGEGCMAAVKRAYLQIYRYEKWVH 189
            ||    |||..|..||..|::.||.||:.  ..|....:||  .||:..:.|:...|...:|...
  Fly   129 YEASQHCCGYNGADDYKRLHLLVPASCYQAAVNDTAQQIYP--SGCLETLNRSQRYIQHRDKLYM 191

  Fly   190 CGLIGYEVVGIILGITLCCQLTNKTRR 216
            ..::|.|:..::..:.|...|....:|
  Fly   192 WAIVGLEIFILLQTVALSVLLFRLRQR 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 53/214 (25%)
tetraspanin_LEL 110..178 CDD:239401 26/76 (34%)
Tsp42EpNP_001260759.1 Tetraspannin <51..213 CDD:278750 46/172 (27%)
tetraspanin_LEL 91..183 CDD:239401 28/99 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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