DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eo and lbm

DIOPT Version :9

Sequence 1:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001260757.1 Gene:lbm / 35623 FlyBaseID:FBgn0016032 Length:208 Species:Drosophila melanogaster


Alignment Length:228 Identity:64/228 - (28%)
Similarity:99/228 - (43%) Gaps:44/228 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVVFSTLTL--IVGVLAALAGVYELDKFNEGSAEHTEKFVQLG-MAGALILA-GLVGCLGAIFG 71
            |||..:::.|  ::|.||  ||......:|..:  .||:||... :|.:|||. .|:|...||..
  Fly     6 TSVKIASIVLNAVLGFLA--AGAIGWIAYNADT--ETEEFVIAAYIACSLILVFALLGIFAAIRE 66

  Fly    72 SIKVMVVNLILLLAL----IASHIWKVSHYNETKQLDATEVYVMDLWMKELVHHGAMQDLQQEYE 132
            |:.:...:.:.||.|    |.|....:..::.....|..||    .|..     ..|..|||::|
  Fly    67 SVVLTATSAVFLLILAILQIVSTCLFLHEFDVKSGRDMVEV----AWQA-----NNMDSLQQKHE 122

  Fly   133 CCGDKGFSDYTSLNMKVPRSCF----HTKDGIHALYPYGEGCMAAVKRAYLQIYRYEK------- 186
            |||.....||..|::.:|.||:    .|.|.:     |.:||:..|:    ..|..:|       
  Fly   123 CCGQSSAQDYIHLSLLIPPSCYADLQQTPDHL-----YLDGCIEKVQ----SFYESDKLRFIIVS 178

  Fly   187 WVHCGLIGYEVVGIILGITLCCQLTNKTRRYTY 219
            ||   |:.:|::...|.:.|.....||.||..:
  Fly   179 WV---LVAFELICFALAVFLAISFKNKQRRMEF 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 60/217 (28%)
tetraspanin_LEL 110..178 CDD:239401 21/71 (30%)
lbmNP_001260757.1 Tetraspannin 8..198 CDD:278750 58/214 (27%)
tetraspanin_LEL <109..169 CDD:239401 22/73 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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