DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eo and Tsp42Eh

DIOPT Version :9

Sequence 1:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster


Alignment Length:235 Identity:59/235 - (25%)
Similarity:93/235 - (39%) Gaps:35/235 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TVRVCLQWTSVVFSTLTLIVGVLAALAGVYELDKFNEG----SAEHTEKFVQLGMAGAL-ILAGL 62
            |.|: |::...|.|.:..:.|.|....|.:.||..:|.    ..:|.|     .:|..| :|.|.
  Fly     4 TTRL-LRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGE-----DLAAVLCVLLGT 62

  Fly    63 VGCLGAIFGSIKV-------MVVNLILLLALIASHIWKVS-HYNETKQL--DATEVYVMDLWMKE 117
            |..:.:||||:.|       ::...:||:.|:...|..|| .|..::..  |:....:.|||  :
  Fly    63 VIVVASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLW--D 125

  Fly   118 LVHHG--AMQDLQQEYECCGDKGFSDYTSLNMKVPRSCFHTKDGIHALYPYGEGCMAAVKR---A 177
            |.|.|  .:...::...|||.....||..|....|.||...:|....|..:..||....|.   |
  Fly   126 LQHEGNSTLNTYEEWLHCCGRNSAEDYLHLEKMPPPSCCLNRDCTKHLNLFMTGCEVKFKEYVGA 190

  Fly   178 YLQIYRYEKWVHCGLIGYEVVGIILGITLCCQLTNKTRRY 217
            ....:....|.   |:.:|..|.:    ..|.|.:..|.:
  Fly   191 KTANFHSLSWF---LVIFEFAGSV----TTCYLVDSIRNH 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 55/222 (25%)
tetraspanin_LEL 110..178 CDD:239401 20/72 (28%)
Tsp42EhNP_523634.1 Tetraspannin 8..220 CDD:278750 56/225 (25%)
tetraspanin_LEL 109..192 CDD:239401 22/84 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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