DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eo and Tsp42Ee

DIOPT Version :9

Sequence 1:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster


Alignment Length:220 Identity:56/220 - (25%)
Similarity:87/220 - (39%) Gaps:27/220 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VFSTLTLIVGVLAALAGVYELDKFNEGSAEHTEKF--------VQLGMAGALILAGLVGCLGAIF 70
            :|:|:..::|:|..:.||..|.............|        :.:.:...::....:||.|||.
  Fly    14 IFNTIVSVIGILGIVYGVLILKSIGVVEVNGQVGFPIQALMPIILISLGSIVVFISFLGCCGAIR 78

  Fly    71 GSIKVMVVN-----LILLLALIASHIWKVSHYNETKQLDATEVYVMDLWMKELVHHGAMQD-LQQ 129
            .|: .|.::     ||||:..:...:...:|..|.:  :|....:.:.|..|..:.|.:.| :|:
  Fly    79 ESV-CMTMSYATFLLILLILQLTFVVLLFTHREEFE--NAMGNVIENAWNSEHTYKGGVFDTIQK 140

  Fly   130 EYECCGDKGFSDYTSLNMKVPRSCFHTKDGIHALYP--YGEGCMAAVKRAYLQIYRYEKWVHCGL 192
            ...|||.....||......||.||....    .|.|  |..||...............|:|..||
  Fly   141 SLHCCGSSSALDYIGKGDLVPPSCCSGS----CLIPTNYYPGCRGKFVELMTTGSDNAKYVGIGL 201

  Fly   193 IGYEVVGIILGITLCCQLTNKTRRY 217
            ||.|::|.|..   || |.|..|.|
  Fly   202 IGIELIGFIFA---CC-LANNVRNY 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 52/211 (25%)
tetraspanin_LEL 110..178 CDD:239401 19/70 (27%)
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 54/215 (25%)
tetraspanin_LEL 106..187 CDD:239401 22/86 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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