DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eo and Tsp42Ec

DIOPT Version :9

Sequence 1:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster


Alignment Length:235 Identity:56/235 - (23%)
Similarity:97/235 - (41%) Gaps:30/235 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VRVCLQWTSVVFSTLTLIVGVLAALAG---VYELDKFN---EGSAEHTEKFVQLGMAGALILAGL 62
            |...|...::||    ||||:|..:.|   :.:|.:|:   .|:..:|.......:.|.:.:...
  Fly     8 VNFILYIVNIVF----LIVGILLIVLGSIMLSDLSRFDVAGSGTDPNTIPICVTVLGGLIFVVSF 68

  Fly    63 VGCLGAIF-------GSIKVMVVNLILLLALIASHIWKVSHYNETKQLDATEVYVMDLWMKELVH 120
            .||.| ||       |:...||..|.:|..::...::    .|.:..|......|..||  :...
  Fly    69 FGCYG-IFRQSVCMTGAYTSMVFVLFILQLVLTCWVF----VNRSAFLGDMSNLVNLLW--DSHD 126

  Fly   121 HGAMQDLQQEYECCGDKGFSDYTSLNMKVPRSCFHTKD-----GIHALYPYGEGCMAAVKRAYLQ 180
            :.||..|::.:.||||..:::|.::.:.||.:|....|     ...::|....||.|..:..:..
  Fly   127 YTAMGVLEETFGCCGDTSYTNYNNIGLSVPGTCCGYLDRQATCNTPSVYQSRPGCSAKFEEFWND 191

  Fly   181 IYRYEKWVHCGLIGYE-VVGIILGITLCCQLTNKTRRYTY 219
            .....:|...||..:: ||.:|.|....|..:....|..|
  Fly   192 NMDIIRWSGLGLCIFDLVVFLIAGALTNCMRSQNAGRQVY 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 53/221 (24%)
tetraspanin_LEL 110..178 CDD:239401 19/72 (26%)
Tsp42EcNP_523629.1 Tetraspannin 7..221 CDD:278750 53/223 (24%)
tetraspanin_LEL 104..193 CDD:239401 21/94 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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