DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eo and Tsp3A

DIOPT Version :9

Sequence 1:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster


Alignment Length:267 Identity:59/267 - (22%)
Similarity:96/267 - (35%) Gaps:90/267 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VRVCLQWTSVVFSTLTLIVGVLAALAGVYEL-DKFNEGSAE-HTEKF--VQLGMAGALILAGLV- 63
            |..|:::...:.:.:..:.|.|....|||.. ||:.:.:.. ..|.|  |.|.::..:||||.| 
  Fly    39 VSQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFLNISLVMILAGTVI 103

  Fly    64 ------GCLGAI--------FGSIKVMVVNLILLLALIASHIWKVSHYNETKQLDATEVYVMDLW 114
                  ||:||:        |.|:.:::..|:.:...|...:              ...|:....
  Fly   104 FLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFV--------------CPQYMNTFL 154

  Fly   115 MKELVH---HGAMQD---------LQQEYECCG--DKGFSDYTS---LNMK--------VPRS-C 153
            .|:..|   |....|         .|||::|||  :.|:.|::.   .|..        ||.| |
  Fly   155 EKQFTHKIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCC 219

  Fly   154 FHTKD---G-IHALYPYG---------------EGCMAAVKRAYLQIYRYEKWVHCGLIGYEVVG 199
            .:..|   | ::.:..||               .||:..|:          .|....|  |.:.|
  Fly   220 INATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVR----------VWAEHNL--YVIAG 272

  Fly   200 IILGITL 206
            ..|||.|
  Fly   273 NALGIAL 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 58/264 (22%)
tetraspanin_LEL 110..178 CDD:239401 24/112 (21%)
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 58/264 (22%)
penumbra_like_LEL 144..267 CDD:239411 26/146 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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