DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eo and tsp-7

DIOPT Version :9

Sequence 1:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_492636.1 Gene:tsp-7 / 192062 WormBaseID:WBGene00006633 Length:232 Species:Caenorhabditis elegans


Alignment Length:236 Identity:55/236 - (23%)
Similarity:84/236 - (35%) Gaps:76/236 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 STLTLIVGVLAAL--AGVYELDKFNE-----GSAEHTEKFVQLGMAGALILAGLVGCLGAIFGSI 73
            :.|.|.||.|:.:  ..:.:| ||:.     |........:.|.:.....|.|.:||.|||..:.
 Worm    16 ANLVLWVGGLSLIIVGSILQL-KFDNVLDILGDERLATPILLLVIGSLCTLLGFLGCCGAIRENY 79

  Fly    74 KVMVVNLILLLALIASHIWKV----------------------SHYNETKQLDATEVYVMDLWMK 116
            .:.|...:||..||...|..|                      ..|:|::.:::.       |.|
 Worm    80 CLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHESRGVESA-------WDK 137

  Fly   117 ELVHHGAMQDLQQEYECCGDKGFSDYTSLNMKVPRSCFHTKDGIHALYPYGEGCMAAVKRAYL-- 179
                      ..|.:||||....||:.:.. .:|.||.     |..:    |||  |.:.|.|  
 Worm   138 ----------THQLFECCGVTNSSDWLTFT-TIPDSCC-----IEEI----EGC--ARENAPLFE 180

  Fly   180 --QIYRYEKWV---------HCG-LIGYEVVGIILGITLCC 208
              .|:..|:||         .|. |...::||:...   ||
 Worm   181 PGCIHSVEQWVLKNGAMVGGICAVLAAIQLVGVCFA---CC 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 55/236 (23%)
tetraspanin_LEL 110..178 CDD:239401 17/67 (25%)
tsp-7NP_492636.1 Tetraspannin 8..223 CDD:278750 55/236 (23%)
NET-5_like_LEL 104..195 CDD:239418 25/119 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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